LOCUS       NM_001134576            1283 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus ciliary associated calcium binding coiled-coil 1
            (Cabcoco1), mRNA.
ACCESSION   NM_001134576 XM_001080360 XM_342127
VERSION     NM_001134576.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Kawashima A, Kigoshi T, Katoh Y, Ishikawa Y, Shawki HH, Inoue N,
            Tamba M, Matsuda M and Okamura N.
  TITLE     CABCOCO1, a novel coiled-coil protein With calcium-binding
            activity, is localized in the sperm flagellum
  JOURNAL   Mol Reprod Dev 83 (10), 912-926 (2016)
   PUBMED   26990073
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473988.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_342127.3, XM_001080360.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p11"
     gene            1..1283
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /note="ciliary associated calcium binding coiled-coil 1"
                     /db_xref="GeneID:361834"
                     /db_xref="RGD:1306739"
     exon            1..127
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..961
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /note="uncharacterized protein C10orf107 homolog"
                     /codon_start=1
                     /product="ciliary-associated calcium-binding coiled-coil
                     protein 1"
                     /protein_id="NP_001128048.1"
                     /db_xref="GeneID:361834"
                     /db_xref="RGD:1306739"
                     /translation="MRASSRENVAGSSIGLTSWGPTTPGVTPAGSTTDSEKNIEFQEN
                     ERILSPDILTTNQIIDLLGEEDVEKIQEKMGTFLNFKNLQTSLRDAILLDYYVAGFCW
                     AKGMNFSIDQYSKFMTLLDMLLQNLQTLHMSLEDSIKWLGEVMAEIGPNHSQKNKNFH
                     IFNVKEANAIIDYLKISLFQHYRLYEFLFYSAREEIVIGTEQTIEAVKPADHPFPAPL
                     EEGISLSMYSAFIEPLPTLDTEQKGLDQEQGPQESLLESEMGEEDPLGGFTIDDVKLA
                     LARVTDEVLISIQNEINEKLQVQEESFNARIEKLKKA"
     exon            128..234
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     exon            235..404
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     exon            405..549
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     exon            550..622
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     exon            623..745
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     exon            746..886
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
     exon            887..1283
                     /gene="Cabcoco1"
                     /gene_synonym="RGD1306739"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 catcccagtt gccttgacga tgagggcttc ctctagagaa aacgtggcag ggtcgtccat
       61 aggattgacc tcctggggcc cgaccacccc tggggtgacg ccagcaggca gcacgactga
      121 ttctgagaaa aatattgaat tccaggagaa tgaaaggatt ctgtctccag atatactcac
      181 cactaaccag atcattgacc tgctgggaga agaggacgtg gaaaaaattc aagaaaaaat
      241 gggaacgttt ctgaatttta aaaatcttca gactagtcta cgagacgcca ttctattaga
      301 ctactatgtg gctgggttct gctgggccaa gggaatgaac ttttctattg accagtattc
      361 aaaatttatg actttgctgg acatgttact tcaaaatctt caaacgctgc atatgtcctt
      421 agaggacagc atcaagtggc tcggggaagt gatggcagaa attggaccaa accattcgca
      481 gaagaataag aattttcata tcttcaatgt caaggaagcc aatgccatca tcgattattt
      541 aaaaatcagc ttattccagc actacaggct ctacgagttt ctgttctact cggccaggga
      601 agaaattgtc atcgggacgg agcaaaccat agaggccgtc aagcctgcag accacccttt
      661 cccagcccct ctggaagaag gtatctcact gagcatgtat tcagccttca tagagccgtt
      721 gccaacgctg gacactgaac agaaggggct ggatcaagag caagggcctc aggaatcgct
      781 gctggagagt gaaatgggag aagaggatcc cttaggtggc ttcaccattg atgacgtaaa
      841 attagccctg gcacgagtga cggatgaggt cttgataagc attcagaacg agataaacga
      901 aaaactgcaa gtacaggaag agtcctttaa cgcgcgaata gagaaactga agaaagcctg
      961 agaatgcagt acaagttaat cttccgagaa accaacaaaa ccggccagaa taataatgtc
     1021 tctatagcac tatgtcacct ccatgaagcc ctggaaggaa aacccacttc ccgttatcct
     1081 gagtgattga caaggcgtcg tcccgcccct cccattccac acccacctct gagtttacag
     1141 ggccaaaagc aagaagagca ttgctttgta tgattttgga agttctatac gaaagtacta
     1201 ttgttttgac taatgaatac tattcctctt tctcggaaat gaaactaacc ttttgaaata
     1261 acaataaaaa aacgtagtaa agt
//
