LOCUS       XM_039082775            1108 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 3 open
            reading frame 86 (C8h3orf86), mRNA.
ACCESSION   XM_039082775
VERSION     XM_039082775.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082775.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1108
                     /gene="C8h3orf86"
                     /note="similar to human chromosome 3 open reading frame
                     86; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:120094305"
                     /db_xref="RGD:41400612"
     CDS             61..543
                     /gene="C8h3orf86"
                     /codon_start=1
                     /product="uncharacterized protein C8h3orf86"
                     /protein_id="XP_038938703.1"
                     /db_xref="GeneID:120094305"
                     /db_xref="RGD:41400612"
                     /translation="MVMGSPPEKTTQTCFIANYMSRSQLEQEKKFLDSFVWVNEITGE
                     TTFPPGEGTTPAASGEKRPARSRSPRGNIPCSVAAHRPASPVNPEAVGRGPGTGSLLL
                     PDLGMPRVLSPPGSALPTQDHLGVSPPLARVFPASPSPPWALSCKLRNVLTGNNRFSF
                     "
ORIGIN      
        1 ctactctgtg aagctatctg tacagactca ccacccaaca accttccaat attcctgcag
       61 atggtgatgg ggagcccacc agagaagacc actcagacat gctttatagc caactatatg
      121 tctaggagtc agcttgaaca ggagaagaag ttcctagatt cttttgtctg ggtaaacgag
      181 atcactggag aaaccacctt tcctccaggg gaggggacta cacctgcagc ctctggagag
      241 aagcgtccgg caaggtcgag gtctccgcga gggaacatac cctgctcggt ggctgctcac
      301 agacccgctt ccccagtgaa ccccgaggct gtgggcagag gccccgggac aggaagcttg
      361 cttctacccg acctgggcat gccccgtgtc ctgtccccac cagggagcgc tctgccgacg
      421 caggaccacc tgggagtgtc ccctccactg gcccgggtgt ttccagctag cccctctccg
      481 ccctgggccc tgtcctgcaa gctaaggaac gtgctgacag gaaacaaccg gttttccttt
      541 tgagctaggg agtgccaagg gagcggtcgc ccatctacac ttgcagtgcc ctctgaaggt
      601 cccatcagcc gcacccccag aagaacaagt ttacaggaat cggcaaaacg ctttcagacc
      661 caatacaaac ttttctgatt gccttctaca tcttccttta cctcctcagc tgtcttgaca
      721 ctttgagggt gaactcagca gttttggtgt tggagtcaaa tcatctgtgg gacagaagca
      781 ggccttgggt ggaatgagaa caggccaggg atccactcac tggacataga gcacagccaa
      841 ggggctgaaa cttgtttttc aggttagcac tccacatgct tcaggactgt gcttagtgtc
      901 cctagtgtct tccggctcca gcctaggaca ggcactcatg tcagagttcc ttgaaaggtt
      961 gtcacctcag tctttcgcta ttctcactgt gtaaaccagg ccacctgcct ctgcctccca
     1021 gagctgggat tcccacttct tactgtttta atttaatgtg tatgcatgtt ttgtctataa
     1081 tccatccatc catccatcca tccatcca
//
