LOCUS       NM_001025011            4198 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 15 open reading frame
            39 (C8h15orf39), mRNA.
ACCESSION   NM_001025011
VERSION     NM_001025011.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4198)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1 and CB717503.1.
            
            On Nov 13, 2008 this sequence version replaced NM_001025011.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            transcript and genomic sequence to make the sequence consistent
            with the reference genome assembly. The genomic coordinates used
            for the transcript record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643284.11286.1,
                                           SRR26360181.1134908.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676808 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-173               JAXUCZ010000008.1  66551663-66551835   c
            174-888             JAXUCZ010000008.1  66547897-66548611   c
            889-1032            CB717503.1         1-144               c
            1033-2961           JAXUCZ010000008.1  66545824-66547752   c
            2962-4198           JAXUCZ010000008.1  66542269-66543505   c
FEATURES             Location/Qualifiers
     source          1..4198
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..4198
                     /gene="C8h15orf39"
                     /gene_synonym="RGD1305464; Sept14"
                     /note="similar to human chromosome 15 open reading frame
                     39"
                     /db_xref="GeneID:315702"
                     /db_xref="RGD:1305464"
     exon            1..173
                     /gene="C8h15orf39"
                     /gene_synonym="RGD1305464; Sept14"
                     /inference="alignment:Splign:2.1.0"
     exon            174..2961
                     /gene="C8h15orf39"
                     /gene_synonym="RGD1305464; Sept14"
                     /inference="alignment:Splign:2.1.0"
     CDS             225..3329
                     /gene="C8h15orf39"
                     /gene_synonym="RGD1305464; Sept14"
                     /note="septin 14"
                     /codon_start=1
                     /product="uncharacterized protein C15orf39 homolog"
                     /protein_id="NP_001020182.2"
                     /db_xref="GeneID:315702"
                     /db_xref="RGD:1305464"
                     /translation="MAEKRPLGPLGPMMYGKLPRLESDLGPGHGLPLSAGNQDSCNYK
                     GAYFSCPIGGTSKAGSERLASWTPYPSLYPSGVAGSPIRGDSLLTNCLLYRPPTEGSE
                     KMQDSSELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGDGAAKRPLDVDWTLV
                     PGPLLPSADPPCSLATAPGKGQPLDGTFLRGLPSGGPGKDSSLTFSPCQTFLEKYRTV
                     QSTGFLASKYPGPYSGDPKQAMSEGPSGPWTQLTQPLGPPCQDAVPAHYPLPPPPQAL
                     PCPPSCRHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYLRQQAAQTPYMPPVGID
                     SYPYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLSFPYARDDLSLYGASPGLGETPP
                     SHSQNSVQPVPQPGAFQRTCQPLPAGQPCSEPMRPAEKPTPEAQEKTWLPSCRKEQLQ
                     SRPSERPGVPIVIRDSPVPRTSPALHPCAKERQSLPQKDARPPSSPPMPVIDNVFSLA
                     PYRDYLDVQTPEPTVEQDSAPATSKSQDKDCKETLPVQDGASRPHRSLREEVALDLSV
                     KKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTASGLPGLKKMVTEIPEVTAEATPRT
                     NFHSSVAFMFRKFKILRPAPLPAAIVPSPPTPVSVPAPTPVPVPVPVPVPVPAQPASN
                     PPSVPMGLQILTQPLPVACFNLALPSPPAIAVASPAPASAPPPSPAPAPASGPAPASA
                     QVPTAAPVYSEQHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAAWQDGQGV
                     QGLLGRLLSQLQKFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDH
                     RVELRPTTLSEERALRERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGG
                     FDTEARALSPSEPTVTRDEPESQVLAGKLPAPKAKKPGKKPPTPGPEKTETTTGEGSC
                     NPSPSSGASTSPPGPTLRARFRNLLETAWLNGVALPTWGHKASGADRPSPHPQLLGSQ
                     THHL"
     exon            2962..4198
                     /gene="C8h15orf39"
                     /gene_synonym="RGD1305464; Sept14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acaaacggcg cccggcggca gcgcgaacgg ccgcgcggaa cgtcgctctg ggctagttgc
       61 ctgccgcgac ttcccgcgca aggccggccc aacagcgacc cgcagcctag gcggcgctgg
      121 aggatgccgc tgccgctccg ggtggcggcc gccagaagct tggtgctctg aaggtcagca
      181 agtcaagtag cagcagttca ggagagcttg acacctgcgc agtaatggca gagaaacggc
      241 ccctggggcc tctggggcct atgatgtatg gcaagctgcc tcgcctggag tcagacctag
      301 ggccaggaca cggcctgccc ctttctgctg gcaaccagga ctcctgcaat tacaaaggtg
      361 catacttctc ctgccccata gggggtactt ccaaggcagg atctgagcgg ttggcatcct
      421 ggaccccata tccatccttg taccccagtg gtgtggcagg atccccgatc cgtggtgaca
      481 gcctcctgac aaactgcctc ctctaccgcc ctccgacaga aggctctgaa aagatgcaag
      541 actccagtga gctcctgccc ttcggtccgc aggctcactc gtacccaggc ccacctctgg
      601 cagcgcccaa gcctgtctac cgcagtcctt tgtgttacgg gctctccact tgccttggag
      661 atggggcagc aaagagacca ttggatgttg actggaccct ggtgcctggg ccccttctgc
      721 cttctgctga cccaccctgt tctttggcta cagctcccgg caagggccag cccctggatg
      781 ggacgttcct gcgtggttta ccgtctgggg gacctggcaa ggactcttcc ctgacttttt
      841 ccccgtgcca gacattccta gagaagtatc gaactgtcca aagcacaggt ttcctggctt
      901 ccaagtaccc tggtccttac tctggggatc ccaagcaagc aatgtctgag gggccctccg
      961 gaccttggac ccagctcacc cagcccctag gaccaccttg ccaggatgca gtgccagccc
     1021 actatccatt gcccccaccc ccacaggcct tgccttgccc tccatcttgt cgccacccag
     1081 aaaagcaggg aagctatggc tctttgctcc cactgccgcc tctgggagcc cacaaggggg
     1141 ctgcatacca agctggtggg ctgggcagcc cctacctgag gcaacaggca gcccagactc
     1201 cctacatgcc ccctgttggg atagacagtt atccctattc ctctgcaccc ctcccggcac
     1261 cctcaccagg gctcaagctg gagccccctc ttgctccgag gtgcccactg gactttgtcc
     1321 cccaaaccct gagttttcct tatgccaggg atgacctctc tctctatggg gcatccccag
     1381 gacttgggga aacaccacct tcccattccc agaacagtgt gcagcctgtg ccacagcctg
     1441 gtgccttcca gcgaacatgc cagcctctac cagccggcca gccatgctct gagcccatga
     1501 gacctgcaga gaagccaacg ccagaagctc aagagaagac gtggctgccc agctgcagga
     1561 aagagcaact ccagtccagg cccagtgagc gacctggggt acctattgtt atcagagaca
     1621 gtccagttcc ccgcacctca ccagcactgc acccctgtgc caaggagcgc cagtctcttc
     1681 cacagaagga tgctagacct cctagctccc caccaatgcc tgtgattgac aatgttttta
     1741 gtctggcccc ctaccgtgac tacctggatg tgcagacccc agagcccaca gttgagcagg
     1801 actcagctcc agccaccagt aagagccaag acaaagattg caaggagacc ctgcctgttc
     1861 aggatggggc ctctaggcct caccgctctc ttcgtgagga ggtggctctg gacttgagtg
     1921 tgaagaagtc aatggcagag gatgtccctg tcaaggtccc tagtcctgag gagcataata
     1981 agcccagtga aactgtcgat gggtcaggta tagaaaacac agcgtcgggt ttgcctggcc
     2041 taaaaaagat ggtcacagaa atacctgagg taactgcaga agccacacca aggacaaatt
     2101 tccacagctc tgtggccttc atgtttcgaa aattcaagat actccgtcct gcaccattac
     2161 ctgcagctat tgttccttcc ccccctactc cagtttctgt ccctgcccct acccctgtcc
     2221 ctgtccctgt ccctgtccct gtccctgtcc ctgcacagcc tgcatccaac cccccttctg
     2281 tgcccatggg actgcagatt ctcactcagc ctttgccagt agcatgtttc aacctggccc
     2341 tgcctagccc accagccata gccgtggcct ccccagcccc agcctccgct ccacccccat
     2401 caccagctcc tgctccagcc tcaggccccg ctccagcttc tgctcaagtt cccactgcag
     2461 ccccagtgta ctcagaacag cacttcacag ggctgcacac atccctctgt gatgccatct
     2521 caggctctgt ggcccattct ccaccagaga aactgcgtga gtggctcgag acaactgggc
     2581 catggggcca ggctgcatgg caggacggcc agggtgttca ggggctacta ggcagactgc
     2641 tctcccagct gcagaagttc gtgtgcacac agcagtgccc cttccctcac gtagtgcggg
     2701 ctggcgccat ctttgtgccc atccatctgg tgaaggagcg tctctttcca aagctgccac
     2761 cggcctctgt ggaccacgtg ctgcaggacc accgtgtgga actacggccc accactctgt
     2821 cagaggagcg tgcactgcgt gaacgagccc tacacggctg cacctcacgc atgctgaagc
     2881 tgctggcact gcgtcagctg cctgacatct accctgacct gctgggccta caatggcatg
     2941 actgtgtccg ccgccagctg ggtggcttcg acactgaggc cagagcttta tccccatcag
     3001 aacccacggt gaccagagat gagccagaaa gccaagtcct ggctgggaag ttgccagccc
     3061 ccaaggccaa gaagccaggg aagaagccac caacacctgg cccagagaaa acagagacaa
     3121 ccactgggga agggtcatgt aatccctcac ctagctctgg tgccagcacc agcccaccag
     3181 gtcccaccct gagggcccgc ttccgcaacc tgttagaaac tgcctggctc aacggtgtgg
     3241 cactgcctac ttggggccac aaggcctctg gagcagatcg gccttcacct cacccccagc
     3301 tcttgggcag ccagacccat catctgtagc attgtcacta gtgctgttgg ggtagccacc
     3361 catctgggga ccactgtgta cctgtcctga catctagctg ctcagggcta ggactggatg
     3421 tgaggctggg ctcacctaac tgggcggaga cttcctgaac ttttaactgg aggatctttg
     3481 ttagaagagg ttccttccct tgagaaaacc tgtgggcatt gaagccaacc ccgcctggcc
     3541 ttgaatcctg actgctgtgt tctgggcaga cacttcacct ctcatgagcc cttgctcccc
     3601 gtttgtagaa taagacaaca cagcctacct cacaagggtt gttgtgggga tgatgtctga
     3661 aatacaacca cagtgcttcg gtttgcttct tgcccaggat aggcctgtga cctcagccag
     3721 gctgtggaat aacaagactg aggttggcag aacgttcttg tcaagtcttc atgtgtcttg
     3781 ggacccagtt accttagagg tacatgatac aatgtgtgtg actcatgcac ttctaaccgc
     3841 aggctgctgc aggtgcaggg ggctggcctg gggctggcct ggagagccta agtctactct
     3901 ggattcatag ctgtaaccta cctgggctgc atctcacacc ccaggaggat tgtctagaat
     3961 tggatgcttc tagagccaag cagctacagg gactggaccc aacaaggctg tgtgagccca
     4021 atgctgggaa atggtctgga ctgggtactc gtggtatttc ccaggactct tggggtcgcc
     4081 tccctgcagt gggctgaatt cagctggtgg atgacaagtt cctatcttat ttaagggttt
     4141 cgttcgatga gactgggcct tgggagacaa ctattaaagc atttgggttg tttttgga
//
