LOCUS       NM_001398982            1260 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 8 open reading frame
            33 (C7h8orf33), transcript variant 1, mRNA.
ACCESSION   NM_001398982 XM_003750371
VERSION     NM_001398982.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Dec 29, 2021 this sequence version replaced XM_003750371.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643294.29688.1,
                                           SRR26360186.2535270.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-263               JAXUCZ010000007.1  110562735-110562997
            264-554             JAXUCZ010000007.1  110563078-110563368
            555-639             JAXUCZ010000007.1  110563511-110563595
            640-786             JAXUCZ010000007.1  110563909-110564055
            787-1260            JAXUCZ010000007.1  110564512-110564985
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1260
                     /gene="C7h8orf33"
                     /note="similar to human chromosome 8 open reading frame
                     33"
                     /db_xref="GeneID:681282"
                     /db_xref="RGD:1597990"
     exon            1..263
                     /gene="C7h8orf33"
                     /inference="alignment:Splign:2.1.0"
     CDS             258..926
                     /gene="C7h8orf33"
                     /note="isoform 1 is encoded by transcript variant 1;
                     UPF0488 protein C8orf33 homolog"
                     /codon_start=1
                     /product="hypothetical protein LOC681282 isoform 1"
                     /protein_id="NP_001385911.1"
                     /db_xref="GeneID:681282"
                     /db_xref="RGD:1597990"
                     /translation="MAEPGHPAREAPAASSRRTNRAPRRPQLSRPASGASDPPLRNSV
                     QPTCDSANRTHPVGNTVSMKQKKKKTPNRVSGTNGKEKPSENPTPDEAPPSAEAQAEQ
                     LARELAWCVEQLELGLRTQRPTPKQKEQAVGAIRTLRSEKTPLPRKRQLMRSLFGDYR
                     AQMDAEWREALRALKAATRSAQVQLVGEAARKKSGRVCRPRPAGRAGTMSDLTNEEFR
                     FNFF"
     exon            264..554
                     /gene="C7h8orf33"
                     /inference="alignment:Splign:2.1.0"
     exon            555..639
                     /gene="C7h8orf33"
                     /inference="alignment:Splign:2.1.0"
     exon            640..786
                     /gene="C7h8orf33"
                     /inference="alignment:Splign:2.1.0"
     exon            787..1260
                     /gene="C7h8orf33"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggttccattc tccccaggga tcgtcttgtt ttttggcggc gcactctgct gggttttccg
       61 aggccttaag ttaagttcct gtgcactctg tcaacccaaa ttacaagcac aacctggagc
      121 gctccgtccc gcggtgagca ttggctctgg gtccgctgta ctttctgcgg aaccttgtgt
      181 cgtagacctg tttccagggg agtgagttcg ctatgggatt tttaggattt actagcttcc
      241 ggtgacctct ccagctaatg gcggagccag ggcatcctgc tcgggaggca ccagcagcct
      301 caagccggag aactaatcgc gctccgcgca gacctcagct ctctcgccca gcttccggtg
      361 cctcggatcc tcctcttcgt aattcagtgc aacctacatg tgactccgcc aacaggacac
      421 atcccgtagg caacacagta tcgatgaagc aaaagaaaaa gaaaaccccg aacagggtct
      481 ctgggacaaa tggaaaggaa aagccctccg agaatcctac tccagatgaa gctcccccta
      541 gtgctgaggc ccaggcggag cagctggcgc gggagctggc ctggtgtgtg gaacagctgg
      601 agctgggtct caggacgcag agacccaccc cgaaacagaa agagcaggct gttggggcaa
      661 tccgaacgtt gcggagtgaa aaaaccccct tgccccggaa gagacagctg atgcgctcct
      721 tgtttgggga ctacagggct cagatggatg cagagtggcg ggaggcccta cgggctttaa
      781 aggctgccac ccgctcggcc caggtacagc tggttggcga ggccgccaga aagaagagtg
      841 gaagggtctg caggcctcgt cctgcaggaa gagccggaac catgtccgac ttgaccaacg
      901 aagagttccg gttcaatttc ttttagaggc tcctacatgc tggactagtc atcccctccg
      961 gggtggtgag ggggatttgt cttgagtgca gggcctttcc aggaatcctc tcagcagaag
     1021 tgggattggt ttgtccctca ggacatgaag ctgctggccg gtgtgaagct gccacgtgag
     1081 aacttttgaa agaaatgttc ttcctgacag aagagagatg tggagtagct gctggtgata
     1141 aggaactgtg gagaagctct cgacacactg ggctcacttt cgaaagggcg ccctggccag
     1201 ttttcagtgc tttacatatt gttatattgc cttaataaat ctttttttaa agaaatagga
//
