LOCUS       XM_006242269            2758 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 12 open
            reading frame 40 (C7h12orf40), transcript variant X1, mRNA.
ACCESSION   XM_006242269
VERSION     XM_006242269.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006242269.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006242269.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2758
                     /gene="C7h12orf40"
                     /note="similar to human chromosome 12 open reading frame
                     40; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:690142"
                     /db_xref="RGD:1584027"
     CDS             94..2049
                     /gene="C7h12orf40"
                     /codon_start=1
                     /product="uncharacterized protein C12orf40 homolog isoform
                     X1"
                     /protein_id="XP_006242331.1"
                     /db_xref="GeneID:690142"
                     /db_xref="RGD:1584027"
                     /translation="MNWVGGSRTRVLIKQERRKQKEYFERNKLKSKMKLLGVFSPVKN
                     PSVSLDLLNLYMVNQISSKKEISETMKRPTHVNMNRDLKIPLRKHNLELPMSPHCVPS
                     KLCIDDVENSVPYQRFYSKEETGPVQSSHDMNSYRMLNETENCSYIPSSFPEELPTNR
                     HILSQRSTPIAPSPRQFAYENPHTGQLSNGQFPESLFSKLNKHQSVFSSSRETAEFGA
                     SYERTNSSETGDFLTESQISVMMGDECGILYERRQPDFAVVKTSVPQIGANSGEEFSH
                     FLEDGIHPTQRHLPDHHDSFINHNMINLLSRDQPGRRATFNQCGYDCLSDAHVVSSDE
                     SQSTNGFIPRNFTVPRAASPNRPFSASYIETCQSNRPCQKQYTNNERNELRRSLEKDC
                     YPVSCGRRGKIESNNQLKTLQRNSQESPVYTMAEIPLEELHHKQSCDFGQNEMPVERR
                     TGPLKGRPVPAEKIYLESSQSSQSTSYSPRPTDSTFSSSSELLSEDEDQNQQQIEHSN
                     KKATETTDHGGLEKVEGHLGDITVKDNAKVHRENHKSHQSSEKDNSDTFPESQCNSEH
                     TPQNKSTANCVLRAGRCDVGVQTEEAPLVGSRADVAVQCTIIAPCSCKSSPSVDTEEE
                     SSLSKAGSCTEDMMSDTTGGQETPTDN"
ORIGIN      
        1 gtcgggagag gtgcaggctg cggtccctct gcgtgacccc gtcagtgtgc aagctgtgag
       61 ctgcgagggc cccgcgtggg agcttctgga gagatgaact gggtcggggg atcccggacc
      121 agggttctga taaaacaaga aagaagaaag cagaaggaat actttgaaag aaataagtta
      181 aaatcaaaaa tgaaattact aggtgttttc tcacctgtca agaatccttc tgtcagttta
      241 gacctcctga atctgtatat ggtaaatcag atatcttcca agaaggaaat atcggaaacc
      301 atgaaaagac caactcatgt gaatatgaat agagatttga aaatccctct aagaaagcat
      361 aatttagaac ttccaatgtc acctcactgt gtaccttcta aactgtgcat tgatgatgtg
      421 gagaacagtg taccctatca aagattctat agcaaggaag aaactggccc ggttcaatca
      481 tcacatgaca tgaactcata cagaatgctc aatgagacag aaaactgcag ttatattcca
      541 tcgtcttttc cagaagaatt acccaccaac agacatattc tgagccaacg ttccacccca
      601 atagctccaa gccctcggca atttgcatat gaaaaccccc acactgggca gctcagtaat
      661 ggacaatttc ctgagtcctt attttccaaa ttaaataaac atcaaagtgt tttcagttca
      721 tctcgggaaa cagcggagtt tggagcgtca tatgagagaa caaacagttc agaaactggt
      781 gatttcctga ctgaatcaca gatctctgtg atgatgggtg acgagtgtgg aattctttat
      841 gaacgaagac agccagactt tgctgtggtg aaaacatcag tgccacagat tggtgcaaat
      901 agtggagaag aattctctca ttttcttgaa gatgggatcc acccaactca gagacatctg
      961 ccagaccatc acgactcttt cattaatcac aacatgatca atttattaag cagagatcag
     1021 cctgggagaa gggcaacctt taatcagtgt ggttatgatt gcctgagtga cgcccatgtc
     1081 gtgtcttctg atgaaagcca gtccactaat gggttcattc ctaggaattt tacagttcca
     1141 cgggcagctt ctcctaaccg tccttttagt gcaagttaca tagaaacatg tcagtcaaac
     1201 aggccctgcc agaagcagta cactaacaat gaaagaaatg aacttagaag atctttggag
     1261 aaagactgtt acccagtcag ctgtggaaga agaggaaaaa ttgaaagtaa taaccagttg
     1321 aaaacattgc agagaaattc ccaggaatcc ccagtgtaca ctatggctga aattcctttg
     1381 gaagaattac atcataaaca gtcatgtgat tttggccaga atgagatgcc agtggaaaga
     1441 agaacaggtc ctttaaaagg gaggccagtg cctgctgaga aaatctacct ggagtcttcc
     1501 cagagcagcc agtccaccag ctactctcca cggccaaccg acagcacgtt cagctccagt
     1561 tctgaactgc tatctgaaga tgaagatcag aatcagcaac aaattgaaca ttcaaacaag
     1621 aaagccacag aaacgactga tcacggtggt ctagaaaagg tggaaggtca cttaggggac
     1681 ataactgtga aagacaatgc caaagttcat agagagaatc ataaatctca ccagtcctca
     1741 gagaaagata atagcgatac atttccagag tctcagtgca attcagagca cacaccacaa
     1801 aacaaaagca ccgctaactg cgtgctccgg gctgggagat gtgatgtagg ggtacagaca
     1861 gaggaagcac ccctggtggg gagcagagca gatgtcgctg tgcagtgcac catcattgca
     1921 ccgtgctcat gtaagagtag tcccagcgtt gacacagagg aggagtcctc cctttccaaa
     1981 gcaggcagct gtactgaaga tatgatgtca gataccaccg gagggcagga aacacccaca
     2041 gataactaac tctaaaatct gaagtaggaa gtagtgtttc atttaaccta ggaaggcaat
     2101 aggaaatgtt cagacctcct ccgttaacat aatacataat gagaaaatga agctgaacat
     2161 aggacgtctg actgttgtta gtgtacagtt ttaacattcg tgaatttaat agtcctctaa
     2221 tagtcttgtc ttagtcaggg ttcctattcc tgcacaaaca tcatgacgaa gaagttggga
     2281 ggaaagggtt tgttcagctt acatttccac attgctattc atcaccaaag gaagtcagga
     2341 ctggaactca ggcaggtcag gaagcaggag ctgatgcaga ggccacggag ggatgttact
     2401 gactggcttg cttcccctgg cttgctcagc ttgctgtctt agagaaccca agattacaat
     2461 cccagggatg acaccaccca caatgggctg ggtcctcccc cgcttgatca ctcattgaga
     2521 aaatgcctta gaactggatc tcatggaggc atttcctcaa gggaggctcc tttctctgtg
     2581 ataactccag cttgtgtcga gttgacacac aaaaccagcc agtacaagcc ttactcgtag
     2641 aaaatttgca cacatacata catatatata atttgccatt cttgatatat atgtcaccat
     2701 tctcatgttt acttgtcttt atttgaatta aaagtccaca actactttat ttctcttg
//
