LOCUS       NM_001415120             785 bp    mRNA    linear   ROD 06-NOV-2024
DEFINITION  Rattus norvegicus ciliary microtubule inner protein 5 (Cimip5),
            mRNA.
ACCESSION   NM_001415120 XM_006239919
VERSION     NM_001415120.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 21, 2022 this sequence version replaced XM_006239919.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.34895.1,
                                           SRR26643429.23328.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840111 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-465               JAXUCZ010000006.1  45525346-45525810   c
            466-505             JAXUCZ010000006.1  45523143-45523182   c
            506-725             JAXUCZ010000006.1  45521893-45522112   c
            726-785             JAXUCZ010000006.1  45521154-45521213   c
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q16"
     gene            1..785
                     /gene="Cimip5"
                     /gene_synonym="C6h2orf50"
                     /note="ciliary microtubule inner protein 5"
                     /db_xref="GeneID:690276"
                     /db_xref="RGD:1582838"
     exon            1..465
                     /gene="Cimip5"
                     /gene_synonym="C6h2orf50"
                     /inference="alignment:Splign:2.1.0"
     CDS             251..697
                     /gene="Cimip5"
                     /gene_synonym="C6h2orf50"
                     /codon_start=1
                     /product="uncharacterized protein C2orf50 homolog"
                     /protein_id="NP_001402049.1"
                     /db_xref="GeneID:690276"
                     /db_xref="RGD:1582838"
                     /translation="MGSQHTGLPRTTSSGYQLPPTRQLATISPGRDGPAAGRALVGGS
                     QGTLAPGVQQDQLWRELVEAEARGQRRWAENWGFLKDYDPLGNKKEPQELPANVPFFS
                     DTFPSSTSREVGSRVDTPLGRALSHMDFFFVEGTRKKKPEDELQPV"
     exon            466..505
                     /gene="Cimip5"
                     /gene_synonym="C6h2orf50"
                     /inference="alignment:Splign:2.1.0"
     exon            506..725
                     /gene="Cimip5"
                     /gene_synonym="C6h2orf50"
                     /inference="alignment:Splign:2.1.0"
     exon            726..785
                     /gene="Cimip5"
                     /gene_synonym="C6h2orf50"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgcactcgg gactcgcctg ttccctgggc gacggtcaac acaggcaggg ctgcaaaaca
       61 cagctgggca cagatgctgt cccagcctgg agtgtttttg gtccccatct gccactctct
      121 ctgagctcga gatccggtgt gggacgatgt gggaacacct tgtgcaggtt attctgggtt
      181 aagacgagag agtctcaacc agtctttctc ttttctttct tctcttcctc tcctgcttat
      241 ctagcctgcc atgggcagcc aacacactgg gcttcctaga accacatcat cagggtacca
      301 actgccccct accaggcagc ttgccacaat ttccccgggc cgggatggcc cggcagcagg
      361 cagggctctc gtgggtggtt cccaggggac tctagccccg ggtgtgcagc aggaccagct
      421 gtggagggag cttgtggaag ccgaagcgcg gggccagcgg cgttgggctg agaattgggg
      481 tttcctgaag gactatgacc ctctgggaaa taagaaggag cctcaggagc tgcctgcaaa
      541 tgtgcccttc ttctcagaca ccttcccttc ctccacaagc cgggaagtgg gcagcagggt
      601 ggacacgcct ctggggagag ccctcagcca catggacttc ttctttgtgg aaggcactcg
      661 gaagaagaag ccagaggatg agctgcagcc agtgtagagc cagctcttgg ggctggtcac
      721 agcagctaac catcaacatc aaccaaccag actcccgccc agagctccct ggactaaacc
      781 accaa
//
