LOCUS       XM_039078175            6748 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 2 open
            reading frame 16 (C6h2orf16), mRNA.
ACCESSION   XM_039078175
VERSION     XM_039078175.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..6748
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6748
                     /gene="C6h2orf16"
                     /note="similar to human chromosome 2 open reading frame
                     16; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein, and 96% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120093230"
                     /db_xref="RGD:40973887"
     CDS             35..6748
                     /gene="C6h2orf16"
                     /codon_start=1
                     /product="uncharacterized protein C2orf16 homolog"
                     /protein_id="XP_038934103.1"
                     /db_xref="GeneID:120093230"
                     /db_xref="RGD:40973887"
                     /translation="MPEIGSSGFIPGAKVPEPQQPHVKSTDVYLGPCLQDVRFSDSVP
                     ESKHHGFTTQFIPGFPLQGRISQGFMPLTQEPKFEDRKLALPTQGSEFHSIKFARQAS
                     ELQRPCMISEKINTGPREQDTKFSELASRPKLQGVIFGEQISGSIFVSGSSMTPELKI
                     HSPKLAKTTPGLQDSRQMSCNSGPWLQDVKFLDGTPGTLSQGVKTSEINSGPHLECVK
                     IFELTTQPEGQGMKPELIVQESPFQDVKRVTGNQEPSFEDKMSYKVISEPQRPMAEPV
                     KLDPGRHLANVDHPELTRRPQTQGIAPSELIKGQLLGHVKSAERNTVSKQEALTSVEL
                     TPGPHLGDIKSTKLKTKSELEHIRSMLSSPGMQAGDRKLEGVPPGSSLKGLKPKLLPS
                     KPKIEDRKPVILTVEECLKRIKSTVVSPNSSLRGDMKSVKLIPGSKVQELKNKGLTRG
                     THVQDVNAMDLKLDPTKRGDSPVTFVPKMLLKEKSMEVCQGPQLQGIKPKELTSQSQM
                     QDRKPVVAPCLKQQSLKPITAAKIQEIQGVKFVDFTSTKQYKGIAPMDLTVKSRQDDQ
                     ITVKSLERKDGIFEQKKKRLESENTLPMESALEPKPADTKPIEINSELQFKDTTSFEL
                     SPEPVVQSVKAEELQNELQGPSMQPCQLTAGSQMHQKKALEPTLAPQLQGVETMALNT
                     EPRVGSTRTIQWIPISEFQSEKGVGSDSRSQSQHARPTELKPPIPWRGVRSSELTARS
                     KIQGEKSVASHLEPQLQGEKTSPLAIGLQEPKTLNLTSEPQPQGVTTEELNKEPQAEH
                     IRSVQWIPLQEFHSARFLGFNSGPPSQGVKRTERKPFIKLGGGKPSEMTQGPKPQGKT
                     VDVNLVPQEQCVRTLQLSPGPELQKGGDSASSSAAQPQCVETVPLHHGPQLENAKSVL
                     QDKTLMQNLGLQPQSVTSKELKPLAQERDMKTSEESTTRPKTEPSRSAQECLSPGLKT
                     IDLKSELPFRNMKACDPILRSMISNVKPMTFKPRLPMEDKSSPELTPGIQSQEAKPLK
                     SSPETQPQDMTSSVFKQESQSSEVKSGVSGQGSQSQNNKNIVLKSEKPSGLALQTKPQ
                     GLKSEMKSEPQGQSAKCSDLTPETKSQNTQFKFSASSPLKSKPFTNLIMGTKIGRVKP
                     DPKPGPQSQGIKPDSVLKTKPQEMETEDYGSGPQLQDLQSLRTIMGVKVQDVKSMAFS
                     PRPRLESLPPEVITEKNVLGVKPAEIKPSPKLQGEKPEITPRKLFLGTKSLELDSGLN
                     LQDLKYPELIMGMKLQGVDSMEQHLTRIKPSEVIPEINSQGVTAVDFDSGPQTPNKRP
                     SEFVQGEKLQDKESVEFNQGLKLQSMIVESVPETKPQDGESVKLNLGPQMPDKKYSKS
                     VLGTILQDGRSTEANSGPYLQGVKPSEGISGDTVQKEKPVGPVFQPLEQNEDSFKWIF
                     SKALDGKPLQFKLPSELQDRRLSKLKPDLQDMKPEAFNPGLKLEDVKAEPTNPQTTEN
                     EEVSYDADLHVVGFSELVPIYNVVPSGLKARNQKRNEKPHKLSQKLQLQSMKPYMPQV
                     KSSDLCTKLQHLRSMEFNPGPQLQDVKSFELGLGTGTQPLGFNPGPQLQDVKSFELGP
                     GTGTQPLGFNPGPQLQDVKSFELGPGTGTQSLGFNPGPQLQDVKSFELGPGTGTQSLG
                     FNPGPQLQDVKSFELGPGTGTQSLGFNPGPQLQDVKPFELGPGTGTQSLGFNPGPQLQ
                     DVKSFELGPGTGTQSLGFNPGPQLQDVKPFELGPGTGTQPLGFNPGPQLQDVKSFELG
                     PGTGTQSLGFNPGSQLQEIKPPAVGTEVKLLEESPLEFKHEPRLQCSRSYDWNHSKNV
                     MAPNTGIQVVESSELHPGPDLPGIKPKVFRFGSHLEDVNSACTPNINFQHVSSSGYIS
                     GPYLQDVDSSTCIPEPNGQCINSECNPGIHLPGMNSSSCFSGSKLQCVASTGSNPESH
                     LQDINSTECTPEPSPQCANSSAHTPGSNPQCADSPACISEPSPQYANSSACTPGPSPQ
                     CENSSACTSEPSPLCENSSVCSQGSSSPCVNSTECTPEPHLQGVNPSVYTPGQNPLCE
                     NSNRYNLGPLFQGMNFCTFPPPQILCVNPVWCNTRIHWQDINSSACNLRQESQSVNSI
                     GYNPGPHLQALKFQEQLKDLKSELTPESNDLDYELGKDLKSQSTTEEIERMLGRVPHH
                     HHGGKLDSLQRLPRVLLLGERSSPDLPRLLLLYNSTLNKSNGIVLVW"
ORIGIN      
        1 tgtgaaatct gatgaagcaa tatcatattc ccaaatgcca gaaatcggat catccggttt
       61 tattccaggg gcaaaggttc cagaaccaca acaaccacat gtgaagtcta cggacgtata
      121 tctaggacca tgcttgcaag atgtgagatt ttctgattcg gtcccagaat ccaagcacca
      181 tggtttcacc acacagttta taccaggctt tccgcttcaa ggaaggatat cacaggggtt
      241 tatgccgtta acccaagagc caaagttcga agataggaag cttgctctgc ctacacaagg
      301 atcagagttt cacagcataa aatttgcaag acaagcctct gaactacaac gtccatgcat
      361 gatctctgag aagattaaca caggacctcg ggaacaagat accaaatttt ccgagttggc
      421 ttcaagacca aaacttcaag gggtaatatt tggggagcaa atctcgggat cgatatttgt
      481 tagtggaagt tctatgactc cagagttaaa gatacacagt cccaaactag caaagacgac
      541 tccaggacta caggattcaa ggcagatgag ttgtaattcg gggccatggc tacaagatgt
      601 caaatttttg gatggaacac cgggaactct ctcacaaggt gtgaaaacct cggagataaa
      661 ctcagggcca cacttagaat gtgtaaaaat ttttgagttg accacacagc cagaggggca
      721 aggaatgaaa ccagaactga tagtacaaga gtccccattt caagatgtaa aacgtgtcac
      781 ggggaatcaa gagccaagct ttgaagacaa aatgtcttat aaagtgatat ctgagccaca
      841 gagaccaatg gcagaaccag tgaagttgga tcctgggaga cacttagcaa atgtagatca
      901 tcctgagttg accagaagac cacagaccca aggcatagca ccttccgaat tgatcaaagg
      961 acagcttttg ggacatgtaa aatctgcaga gaggaacaca gtctcaaagc aagaagctct
     1021 gacgtctgtg gaattaacac cagggccaca tttgggagat attaaatcta caaaactaaa
     1081 gacaaagtca gagctggagc atatcagatc tatgctgtca tccccaggga tgcaagcagg
     1141 agataggaaa cttgaggggg tgcccccagg ctccagtttg aagggtttaa aaccgaagtt
     1201 actaccttca aagccaaaaa tagaagatag gaaacctgtg atcttaactg tagaagagtg
     1261 tctcaagagg ataaaatcta ctgtggtatc cccaaatagt tccctgagag gagatatgaa
     1321 atctgtgaag ttgattccag gttcaaaagt tcaagagttg aaaaataagg ggttgacccg
     1381 tggtacacat gttcaagatg taaatgccat ggacttgaaa cttgacccaa caaagcgagg
     1441 ggatagtcct gtgacttttg taccaaagat gctgttaaaa gagaagtcta tggaggtgtg
     1501 tcaagggcct caactgcaag gtataaaacc caaggaactg acttcacagt cacaaatgca
     1561 agataggaaa cctgtggtcg caccatgttt gaaacagcaa agtctaaaac ctataactgc
     1621 agccaaaata caagagatcc aaggagtaaa atttgtagat ttcacctcaa caaaacagta
     1681 taaagggatt gcacccatgg acttaactgt taagtctcga caggatgacc agataactgt
     1741 aaaatcacta gagaggaaag atgggatttt tgagcaaaag aaaaaacggc ttgaatcaga
     1801 aaatacattg cccatggagt cagctctaga acccaaacct gcagatacaa aacccataga
     1861 gatcaactct gagttacagt tcaaagacac aacctctttt gaattgtctc ctgagccggt
     1921 tgttcaaagt gtaaaagctg aagaactcca gaatgaactc caggggccaa gtatgcaacc
     1981 ttgccagttg actgcagggt ctcagatgca tcaaaagaaa gccttagagc caacattagc
     2041 tccacagctt caaggtgtgg aaactatggc actaaataca gaaccccgag ttggaagtac
     2101 aaggactatt caatggatac caatatctga gtttcaaagt gagaaaggtg tagggtcaga
     2161 ctcaaggtca cagtctcaac atgccagacc tacagaactg aaaccgccta taccgtggag
     2221 gggtgtgagg tcatctgaac tgactgccag gtcaaaaatt caaggagaaa aatctgtggc
     2281 atctcatctc gagccacagt tgcagggaga aaaaacctct ccattagcaa tagggttgca
     2341 ggaaccaaag actttgaact tgacttcaga gccacagcct caaggcgtca caacagagga
     2401 gctaaacaaa gagccacagg ctgaacacat aagatctgtt cagtggatac ctctacagga
     2461 gttccacagt gccaggtttt taggattcaa tagtgggcca ccatctcaag gtgtcaaacg
     2521 gacagaacgg aaacccttca taaaattggg aggtgggaag ccgtcggaaa tgactcaagg
     2581 gccaaaacct caagggaaaa ctgtggatgt taacctcgtg ccacaagagc agtgtgtgag
     2641 gaccctccag ttgtcaccag gaccagagct acaaaagggg ggcgactctg cctcgtcttc
     2701 agcagcacag cctcagtgtg tggaaactgt gcccttgcac catggaccac agcttgaaaa
     2761 cgcaaaatct gtcctccaag ataagacact tatgcagaat cttgggttac agcctcaaag
     2821 tgtcacttcc aaagagttaa aacccttggc acaagaaagg gacatgaaga catctgagga
     2881 gtcgacgacc aggcccaaaa cggaaccttc ccggtcagct caggaatgct tgtctcctgg
     2941 gctcaaaaca attgatttga aatctgagtt accgtttaga aatatgaaag catgtgaccc
     3001 catcttaagg tcaatgatca gtaatgtaaa accaatgaca ttcaagccca ggctccctat
     3061 ggaagacaag agctctcctg aattgacccc tgggatacag tcacaagaag caaaaccctt
     3121 aaagtcatcc ccggaaacac agcctcaaga catgacatct tcagtgttca aacaagagtc
     3181 gcagtcttca gaagtgaaat ctggagtatc aggccaaggg tcacagtcac aaaacaataa
     3241 aaatatagtt ttgaagagtg agaaaccctc tgggttggca ctccagacga agcctcaagg
     3301 tttgaaatct gagatgaagt ctgagcccca ggggcaaagt gcaaaatgtt ctgacttgac
     3361 acctgagaca aagtcccaaa atacacaatt taagttcagc gccagctcac cgttgaaaag
     3421 taagccattt actaatttaa tcatggggac caaaattgga agggtcaagc cagaccctaa
     3481 gcctgggcca cagtcccaag gtataaaacc ggactcagtt ctgaagacaa agcctcaaga
     3541 aatggagaca gaagactacg gatcgggccc gcagttacaa gatctgcagt ctttgcggac
     3601 gatcatgggt gtaaaagtcc aagatgtcaa atctatggcc ttcagtccta gaccacgctt
     3661 agaaagttta ccacctgaag tcatcacaga gaagaacgtt cttggtgtga aaccagcaga
     3721 aatcaaacct agtcccaaat tacaaggtga gaaacctgag attaccccaa ggaagttgtt
     3781 tttaggcaca aaatctttag agttggattc aggccttaat ttgcaagatt tgaaatatcc
     3841 tgagctgatc atgggcatga aacttcaagg ggtagactcc atggaacaac acttgacacg
     3901 tataaagcct tctgaggtga ttccggaaat aaactctcaa ggtgtaacag cagtggactt
     3961 cgactctgga ccacagacac caaataaaag gccttctgag ttcgttcaag gggaaaagct
     4021 ccaagataag gaatctgtag agtttaatca aggtctaaag ttacaaagta tgattgtcga
     4081 gtcagtacca gagacaaagc cgcaagatgg ggaatctgta aagttaaact taggccctca
     4141 gatgccagat aagaaatatt ctaagtcagt tctggggaca atacttcaag acggaaggtc
     4201 tacagaggcc aattctggcc catacttaca gggtgtaaag ccttctgaag ggatttcagg
     4261 ggacacagtt cagaaagaga aacctgtggg ccctgtgttt cagccactgg agcaaaatga
     4321 agactctttt aaatggattt tctctaaggc acttgatggg aaacctttgc agttcaagtt
     4381 accctctgag ttacaagaca ggagactatc taagttaaaa ccagatcttc aagatatgaa
     4441 gcctgaggca ttcaaccctg gactaaagtt ggaagatgtg aaagctgagc ccacaaaccc
     4501 acaaacaaca gagaatgagg aggtcagtta tgatgcagac ttgcatgttg tgggattctc
     4561 tgagttggta ccaatttaca atgtggtacc ttctggactc aaagccagaa atcagaagcg
     4621 aaatgagaaa cctcacaaat taagtcagaa gcttcagctt caaagtatga agccgtatat
     4681 gccacaggtc aagtcatcag acttatgtac aaagcttcaa cacctgagat caatggaatt
     4741 caaccctggg ccacagttgc aagatgtgaa gtcctttgag ttgggcctgg gaacaggtac
     4801 acagccttta gggttcaacc ctgggccaca gttgcaagat gtgaagtcct ttgagttggg
     4861 cccgggaaca ggtacacagc ctttagggtt caaccctggg ccacagttgc aagatgtgaa
     4921 gtcctttgag ttgggcccgg gaacaggtac acagtcttta gggttcaacc ctgggccaca
     4981 gttgcaagat gtgaagtcct ttgagttggg cccgggaaca ggtacacagt ctttagggtt
     5041 caaccctggg ccacagttgc aagatgtgaa gtcctttgag ttgggcccgg gaacaggtac
     5101 acagtcttta gggttcaacc ctgggccaca gttgcaagat gtgaagccct ttgagttggg
     5161 cccgggaaca ggtacacagt ctttagggtt caaccctggg ccacagttgc aagatgtgaa
     5221 gtcctttgag ttgggcccgg gaacaggtac acagtcttta gggttcaacc ctgggccaca
     5281 gttgcaagat gtgaagccct ttgagttggg cccgggaaca ggcacacagc ctttagggtt
     5341 caaccctggg ccacagttgc aagatgtgaa gtcctttgaa ttgggcccgg gaacaggtac
     5401 acagtcttta gggttcaacc ctgggtcaca gttgcaagaa ataaaacctc ctgcagtggg
     5461 cacagaggtc aagctgctgg aagagtcgcc cctggaattc aagcatgaac ctagattgca
     5521 gtgtagcaga tcctatgact ggaatcacag taaaaacgtt atggcaccca acactgggat
     5581 acaagttgta gaatcatctg agctgcaccc tggtccagac cttccgggta taaaacctaa
     5641 ggtgttccgc tttgggtcac acttggaaga tgtgaattcc gcatgtactc ccaatataaa
     5701 ttttcaacat gtaagttcca gtgggtatat atctgggcca tatttgcaag atgtggattc
     5761 ctctacatgc attccagagc caaacggtca gtgtataaac tctgagtgca atcctggaat
     5821 acatttgcct ggaatgaatt cttcctcatg cttttcagga tcaaaattgc aatgtgtagc
     5881 ttctacgggg agcaaccctg agtcacattt gcaagacata aattctactg aatgtacccc
     5941 agaaccaagt cctcagtgtg cgaattcttc agcgcatacc ccaggatcaa atcctcagtg
     6001 tgctgattct cctgcatgca tctcagagcc aagtcctcag tatgcaaatt cttctgcatg
     6061 taccccaggg ccaagtcctc agtgtgaaaa ttcttctgca tgcacctcag agccaagtcc
     6121 tttgtgcgag aattcttctg tatgttccca agggtcaagt tctccttgtg tcaattccac
     6181 tgagtgcact cctgaaccac acttgcaagg ggtgaatcct tctgtataca ccccagggca
     6241 aaaccctctg tgtgaaaatt ctaataggta taatcttggg ccactttttc aaggtatgaa
     6301 tttttgtaca ttcccaccac cacaaattct atgtgtaaat cctgtttggt gcaatactag
     6361 aatacattgg caagatataa attcttctgc atgtaaccta agacaagaat ctcagtctgt
     6421 aaattctatt ggctacaacc ctgggccaca tttacaagct ctgaaatttc aagaacagtt
     6481 gaaagatttg aagtctgaat taaccccaga gtcaaacgat ttggattacg aactgggaaa
     6541 agacctcaag tctcaaagta ccacggaaga aatcgagcgg atgctcggaa gagtgccgca
     6601 tcaccatcac ggaggaaagc tagattctct acaacgcctt ccaagagtcc tactcctagg
     6661 ggaacgttcc agtccggatc ttccccgtct cctgcttctg tacaattcca cactcaacaa
     6721 aagcaatggt atagtcctgg tgtggtag
//
