LOCUS       XM_056985544             962 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 8 open
            reading frame 88 (C5h8orf88), transcript variant X1, mRNA.
ACCESSION   XM_056985544
VERSION     XM_056985544.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985544.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..962
                     /gene="C5h8orf88"
                     /note="similar to human chromosome 8 open reading frame
                     88; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 32 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100912373"
                     /db_xref="RGD:6487307"
     CDS             179..574
                     /gene="C5h8orf88"
                     /codon_start=1
                     /product="uncharacterized protein C8orf88 homolog isoform
                     X1"
                     /protein_id="XP_056841524.1"
                     /db_xref="GeneID:100912373"
                     /db_xref="RGD:6487307"
                     /translation="MTMETKKLIGKPLQPARPVRHLSSPPGPVFPFNFQNEYPCNTQC
                     LQSGVGRCKTNGMQAFSQGLNEQQQHQSPVKKERIKYSRDFLLKLSSVSICRKKPDFL
                     PDHPIVLQKPVSVPHFLIAKLYSGKQPKF"
ORIGIN      
        1 cgcgcccgcg ccccgccccc agccggctgc cgcggcgacc caggccgcga ggcgacgcgc
       61 ggcgggagcc gttccccgac ggcagccggg cgctcggccg ccgtgtctgg gctgagcgcc
      121 gcgacgccgc gccggaaacc ctcctgggtc ttgaggcgta tggaacctca aggtctttat
      181 gacaatggaa acaaaaaaat tgattggcaa accgcttcaa ccagcaagac ctgttcgtca
      241 tctctcttct cctccaggac cagtgttccc tttcaacttt cagaatgaat atccatgcaa
      301 cactcagtgc ttacaaagtg gagttggcag atgtaagacg aatggaatgc aagccttttc
      361 tcaaggtctc aatgagcagc agcaacacca gtctccagtt aaaaaagaga gaattaaata
      421 cagcagagat ttcttgttga agctttcaag tgtttccatc tgcagaaaaa aaccagactt
      481 tctgcctgat catcccattg tacttcagaa accagtgagt gttcctcact tccttattgc
      541 aaaattgtat tcaggaaaac aaccaaagtt ttaagtagca ttttaagaac agatgaattt
      601 gaagataaag aattattcat tttatatttt ggacacctgc caatgaagtg gacctagtaa
      661 caataactaa tggactgtga cgattcaatt tatttttact tttgatggtt ggctatttgg
      721 cttctcataa aaggagaaag agatatttta aagtataaag aatttttcta atcagtttca
      781 gctttgcagg cagctcctgc aaaaattggg aaggaacact cgaaagtagg gatgttgttg
      841 gcgaagtggg aagactgtat tataatttgc atgctacttg caattcttgt ttttcaccac
      901 ttgtaataat ggaatggaaa tgtaagctgt aaagattctc aaatataaaa tatttgctac
      961 ga
//
