LOCUS       XM_575796               3324 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 6 open
            reading frame 163 (C5h6orf163), transcript variant X1, mRNA.
ACCESSION   XM_575796
VERSION     XM_575796.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_575796.7.
            
            On Jan 21, 2021 this sequence version replaced XM_575796.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3324
                     /gene="C5h6orf163"
                     /note="similar to human chromosome 6 open reading frame
                     163; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 11 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:500434"
                     /db_xref="RGD:1563056"
     CDS             2264..3250
                     /gene="C5h6orf163"
                     /codon_start=1
                     /product="uncharacterized protein C6orf163 homolog isoform
                     X1"
                     /protein_id="XP_575796.2"
                     /db_xref="GeneID:500434"
                     /db_xref="RGD:1563056"
                     /translation="MIRNPDFTNFVCCAVCNKIIPPAPFGETFKRIHEYKPFKTRFYT
                     HKDILEIGDSILNQEEQFQEAALKETIKKAEAKVWEKAETLQRQAVDQALEDADARHK
                     FEIRVLEEQHQKDLKALEAKTKVEMIQQMDDELKREHTAAEQRMVHRIQRIMMECHRE
                     KMEAVQKAREEEREIAQKVIEDQRSIVLEELVTTGVTAIKDQKASLGQLIKAKEHEMN
                     VYYGIAQRQKQEEVQEVLQEKEKTHQATLDNVMGKLVNTQGELLSVAKQLGIMTNWKD
                     FLEEELQETRAAFQKYINYTFPKLTPGHADFILPERKKTPSRLAKETDKSTD"
ORIGIN      
        1 gtagacaacc aaaggggatc aaggggatat aaattggcaa agaaattaag gtatcacttt
       61 ttgcagatga tatgatagta tacatatgag accccaaaaa ctctgccaga gaatttttac
      121 agctgataac ttcagcaaaa tggctagata taaaattaac tcaaataaat cagtagcctt
      181 cctttataca aatgatggat gggctgagaa agaaattagg gaaacaatac ccttcacagt
      241 agtcacaaat aatatataaa gtatcttggg gtaactttaa ccaaacaagt gaaagatctg
      301 tattacagaa cttccagact ctcaagaaag aaatgaaggt tcaggtcctt aataaaacca
      361 aacctactgg aaacactgtg tgacacagtc aagcaaatga aaacaatttc aatagcttca
      421 tctaatcagc agaacagatg tttgtagcag gctgaattgc taaagctaat ttctctctaa
      481 aatgatagga acaaattact tttgttcaaa acacatatgt ctgagttagg gttttactgc
      541 tgtgaacaga caccatgagc aaggcaaccc ttataagggc aacatttcat tggggctgac
      601 ttacaggttc agaggttatg tgcattatca aggtgggaac atggcagcat caaggcaggc
      661 atggttcagg aggagctagg agttctacat cttatctaag ggcctctagg agaagactgg
      721 cttccaaggt agctacgatg agggccttaa agcctgtgct cacagtgaca cacttcctcc
      781 aacaaggcca tgcctactcc aacaaggcca tgcctactcc aacaaggcca cacctcctaa
      841 tggttgccac gccttgggcc aaggagatac aagccatcat accagccatg ataagctggt
      901 gtggtagcat gtgcctgtaa ttataaggta agagaaggta taaggtataa gggtggccta
      961 caaatcaatt tccaggcaag ccacagtgat gtaggtaagc cctgtcacaa gcaaacaaaa
     1021 ccctcaaaag tgtcccgtct ctgcctctgc ttgcagctta agatgtgatt tctccagctg
     1081 ctctaccacc atgcttctac tccatcacca cagactctta accctctgaa accataagcc
     1141 aacggaacgc ctcctataat tcttcatggc atttttattc cagcaataaa aatgtgacca
     1201 agctgtccat cccaatctga aaatcaggct tggtaattgt gaatactgac ttaatgacag
     1261 taaaatttcc aatagaatcc cactacattt cccagttcta ctctcctgcc accaaagcac
     1321 attcacagtt acctgaaaat gattcagaga ctgcgtccac tgtccattaa ttaaaaaagc
     1381 acacttaaga catggccaac tgaatgttcc ctcccacagt cagatcctga cagttggccc
     1441 ctgtgagtaa gtatacagta gaaaggacct tgtgtctctg atcacatgta ggatttgtga
     1501 tgacagggtc agcctggttc atgtggagat gtacaacact ggttctcaac tttcctaatg
     1561 ctacgaccct ttcatacagt tcctcacgtt gtagtgatcc cctaccataa aattactttc
     1621 atgactactt caaaactgta attttgttcc tgttatgaat tgtaatgtaa atagagattt
     1681 gccaatacag attttgtagg gggtcacagc caacaggtcg agaactgctg ctggtctaca
     1741 aggaaccagc ccccctagta tcttggtttt aaccctaaaa tcattttgca ttctggcttc
     1801 ccaaaattcc ataggataaa ttgtgttgta ggtaagtcgt gaagactgtg ttcacttaca
     1861 gcagcaagag gcaactcaag ggaacgaaca gcagctatat ctgctctcac ttggcattat
     1921 ttcaggttgc ttttatgagc aaagcttgtc ttacctagca acagttgtta agtaagttga
     1981 caacttaatg ctggaccctg ggagggagaa actactcatc tctgtccaac ccagtgctca
     2041 accttgagag gcagaggctg gtaaaaccat tctttagaca aacagccact gccaagtcac
     2101 gatgaattgt ttagttcttg ccaggctcta gtagaatctt gaagccctgc ccctcccccc
     2161 tccagctata gacgtctagc ttctcttgaa accatcatta tttttttttc tgatcctgat
     2221 attattttaa ctataagtag taaaagatat cagagattta actatgatca gaaatccaga
     2281 ttttactaat tttgtttgct gtgctgtttg caataaaata attccaccag cccctttcgg
     2341 ggagaccttc aaacggatcc atgagtacaa gccatttaag acacgcttct acactcacaa
     2401 agatatcctg gaaattgggg acagtattct gaaccaagaa gagcagtttc aagaggctgc
     2461 gctcaaggaa accattaaaa aagcggaagc caaagtgtgg gaaaaggctg aaacgctcca
     2521 aagacaagca gtggatcaag cacttgaaga tgcagatgcc agacacaaat ttgaaattcg
     2581 agttctggaa gaacaacatc aaaaagactt aaaggctcta gaagctaaaa ccaaggtgga
     2641 gatgattcag cagatggatg acgagctgaa gagggagcac acggctgcgg aacagcgcat
     2701 ggtccatcgg atccagagga tcatgatgga gtgtcaccgg gagaagatgg aggccgtgca
     2761 gaaagccagg gaagaggaga gagagattgc gcagaaagtt atcgaggacc agagaagcat
     2821 agtcctggag gaacttgtga ctactggtgt aacagctatt aaagaccaga aggccagctt
     2881 gggtcagttg atcaaagcaa aggagcatga aatgaatgtc tactacggca ttgctcaaag
     2941 gcagaagcaa gaagaagtgc aagaagtgct tcaagagaaa gaaaaaacac accaggccac
     3001 ccttgacaat gtgatgggca aactggtcaa tacccagggg gagctgctgt cggtggcaaa
     3061 gcaactggga atcatgacaa actggaaaga ttttctggag gaggaattac aggaaaccag
     3121 ggccgcattt cagaagtata tcaattacac ctttcccaag ctcaccccgg gacatgccga
     3181 cttcattctg ccagaaagaa agaaaacgcc ttccaggctt gctaaggaaa ctgataagag
     3241 tactgattag aggtcattgg ccaaaaggcc actagaaaag acgtcattcc gaaactaaat
     3301 aaatgtactc aaaaccgact gtca
//
