LOCUS       NM_001009711            1130 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            174 (C5h1orf174), mRNA.
ACCESSION   NM_001009711 XM_342989
VERSION     NM_001009711.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087640.1.
            
            On Jan 13, 2005 this sequence version replaced XM_342989.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087640.1, CO405912.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1130
                     /gene="C5h1orf174"
                     /gene_synonym="RGD1304567"
                     /note="similar to human chromosome 1 open reading frame
                     174"
                     /db_xref="GeneID:362671"
                     /db_xref="RGD:1304567"
     exon            1..55
                     /gene="C5h1orf174"
                     /gene_synonym="RGD1304567"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..709
                     /gene="C5h1orf174"
                     /gene_synonym="RGD1304567"
                     /codon_start=1
                     /product="UPF0688 protein C1orf174 homolog"
                     /protein_id="NP_001009711.1"
                     /db_xref="GeneID:362671"
                     /db_xref="RGD:1304567"
                     /translation="MRSRKLTGGVRSSARLRARSCSSTSLASAGDIASSTSAKTTCLA
                     SSSHKATDRRTSKKFKYDKGHLLKAELQKVDPKSDISSLPKVVPVAPCENKFAEDGAE
                     AAVPAPENTAPPQGCSKPVSEEPSVKAEEGLPTAPRSAAAAQETHDSSASQAEPVPVL
                     QMDSSVFLDDDSNQPMPVSRFFGNVELMQDLPPASSSCPSMSRREFRKMHFRAKDDDE
                     DAEG"
     exon            56..169
                     /gene="C5h1orf174"
                     /gene_synonym="RGD1304567"
                     /inference="alignment:Splign:2.1.0"
     exon            170..607
                     /gene="C5h1orf174"
                     /gene_synonym="RGD1304567"
                     /inference="alignment:Splign:2.1.0"
     exon            608..1098
                     /gene="C5h1orf174"
                     /gene_synonym="RGD1304567"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgagactcgg cggaggagcg ttgggcaggg gcgctcactc atgaggagca ggaagctcac
       61 aggtggagtg cggtcctcag cgcgccttcg ggcccgaagt tgctcttcta ccagcttggc
      121 ctctgccggg gacatcgcca gctccacgtc tgccaaaaca acatgtctgg cttcctcatc
      181 acacaaggct acagacagac ggacttccaa aaagttcaag tatgacaaag gtcacctttt
      241 gaaggcagaa ttacaaaaag ttgatcctaa aagtgacatt tcttctttgc caaaagtggt
      301 ccccgtggcc ccttgtgaaa ataagttcgc agaggacggt gctgaggctg ctgtcccagc
      361 accagagaac acagcgcctc ctcagggctg ctccaaaccg gtgagtgagg aaccctcagt
      421 aaaggctgaa gagggcctgc ccacagcacc ccgcagtgct gctgcagccc aggagaccca
      481 tgacagctct gccagtcagg cggagcctgt gcccgtcctt cagatggaca gcagcgtctt
      541 tctagatgat gacagcaacc agcccatgcc tgtgagccgc ttcttcggga atgttgagct
      601 tatgcaggat ctgccaccag cctcttcgtc ttgtccttcc atgagcagac gagaattcag
      661 aaaaatgcac ttcagagcca aagatgatga tgaggatgcc gaggggtaga agtggcaggg
      721 acggtacagc cacttttaaa attctgtaca acatgttcaa gagaacacgt tgttaactga
      781 gcgcaaactt gacatggatg tcactggcac agatgcccgg ctcctgcggc agggccctta
      841 caaccacagg ctgctgcccc cgctgctgtg tgtcttcttt catggacaca ccacaccacg
      901 agggcatggg gccgggccgt gggaaacaag aattcctgag tgctttggtt ttggtaacaa
      961 gcttactttc catgccagac tgatcactgc agatgaattg tttatgtgga aggactcctg
     1021 tttctgagtg aagctaacca tttaccttgt ttttgcaaag tatatatgag aaggaaataa
     1081 aatatatttt gaaaattaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
