LOCUS       NM_001014072            1779 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            159 (C5h1orf159), mRNA.
ACCESSION   NM_001014072 XM_233724
VERSION     NM_001014072.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083613.1.
            
            On Apr 20, 2005 this sequence version replaced XM_233724.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083613.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132291, SAMD00132293
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1779
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /note="similar to human chromosome 1 open reading frame
                     159"
                     /db_xref="GeneID:313775"
                     /db_xref="RGD:1311517"
     exon            1..121
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            122..233
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            234..327
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     CDS             256..855
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /note="uncharacterized protein C1orf159 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C1orf159 homolog
                     precursor"
                     /protein_id="NP_001014094.1"
                     /db_xref="GeneID:313775"
                     /db_xref="RGD:1311517"
                     /translation="MALQCLMLLTGLVVGGMSKSTESKAQQPECCMDVVDVNATCLGT
                     GLCGPGCYRHWNADGSASCVRCWNGTLPTYNGSECRILTGRGMQFPMNRSTGTPGQPH
                     FGGPHVAASLFLGTLFISTGLILSVAGFFYLKRSSKLPEVFYRRDRAPVLQPGETAAM
                     VPLPQSSVRKPRYIRREQHPEKNRDPSAFSTVEAHISNV"
     exon            328..403
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            404..499
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            500..565
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            566..700
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            701..726
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            727..757
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
     exon            758..1753
                     /gene="C5h1orf159"
                     /gene_synonym="RGD1311517"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggaggtggc tgctgcaact acacgttaaa ggctccgggt agcccagact ccaggactca
       61 tccaaggcct agcgggacag tacccaccct gtctgcctgc cattttgtca gtgatgaggc
      121 gacttcctcc acctaggaag ctcagactac tattgttcca gaactggaga tgcccagctt
      181 acctgctatt tcaagcttca atggcctctg ctaagtaaaa agtcttccta gagatctccc
      241 tgccagctcc ccagcatggc actgcagtgt ctcatgctcc tgactggcct tgtggtggga
      301 ggcatgagca aatccacaga aagcaaggcc cagcaacctg agtgttgtat ggatgtggta
      361 gacgtcaatg ctacctgcct aggtacaggt ctctgtggcc caggttgcta caggcactgg
      421 aatgcagatg ggagtgctag ctgtgttcgg tgctggaatg ggaccctccc gacatacaat
      481 ggctctgagt gcagaattct cactggccgg ggcatgcagt ttcccatgaa cagaagcaca
      541 gggacacctg gacagccaca ttttgggggt cctcatgtgg cagcttccct cttcctgggg
      601 acactcttca tcagcacagg cctcatcctc tctgtggctg ggttcttcta cctcaagcgc
      661 tccagtaagc tcccggaagt tttctacagg agagacagag cccctgtcct gcagcctggt
      721 gaaacagctg caatggtccc cctgccacag tcttcagtga gaaagccaag atacatcagg
      781 cgtgagcagc acccagaaaa gaatagggat ccttctgcct tctccacagt agaggcccac
      841 atcagcaacg tctgacgtag aggtcaactg agatgtcaca atacagcagt ggaggcctgg
      901 ggcttaagat atgccagaat tgtctcccaa ggacagacac gtacaaatgc tgggggatgc
      961 taccctccat gccaggagat cttcactgtg tggtttaaca ggagtaacat ctgtgagacc
     1021 tgaggactca agagcaagtc atgtggggtc tgtgcccctt aggagtaaca gcatctgtaa
     1081 cagccgtaac acaggcctga ttcaaatgat caaaacttct ggagcccacc cactggaact
     1141 catagcagac agcatctctc cttcaccacc cagctaagaa gagtgaaacc aaggtcccaa
     1201 cagtggagaa aacacagcct ggaaactggt accagccata ggttgctcta gtgtcagctg
     1261 ctacttaact gctggcctct caaggcacat atttctcaga gttgcagaat tgagtgtcct
     1321 gggttttctg attccagaag ccatcagaac cttgtctccc aaggtcagac ttccatccag
     1381 gcacctttca ggctgggcac tcaaagtaaa atgtttaccc atggggtctc catctctgaa
     1441 cacttcagat cacttgtccc attgggcttg cgagatcatg ctggtcagca gtcctgtctt
     1501 tgctgttcca agactccaga agctatgtct gtgatctgct agtgtggctg gtggcattgg
     1561 tcatgtgctc ctgtagaaga cagtgcaagc caccctccat gtgtggtcca aaggtgtcta
     1621 gcatcttctt cagcatcagg cacacatctg atgttcctca cagtgttgtg agtttgtttt
     1681 cccagactta aaccagtggc tcaggtagca gcagcaattt aaagttggac caattaaatt
     1741 agactagatc ttcaaaaaaa aaaaaaaaaa aaaaaaaaa
//
