LOCUS       NM_001014037            2323 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 5 open reading frame
            34 (C2h5orf34), mRNA.
ACCESSION   NM_001014037 XM_227082
VERSION     NM_001014037.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078991.1.
            
            On Apr 20, 2005 this sequence version replaced XM_227082.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078991.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132266
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q15"
     gene            1..2323
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /note="similar to human chromosome 5 open reading frame
                     34"
                     /db_xref="GeneID:310377"
                     /db_xref="RGD:1306227"
     exon            1..150
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            151..381
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..2103
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /codon_start=1
                     /product="uncharacterized protein C5orf34 homolog"
                     /protein_id="NP_001014059.1"
                     /db_xref="GeneID:310377"
                     /db_xref="RGD:1306227"
                     /translation="MGTAAEVRMVLYEDDSVQVNYADGSTLQLSPCGSEFLFEKAPPP
                     STHPLEQPERIRQRTHFVISNYREQLQRALDFRNSSATCPFLSESIIPSERKKRVFID
                     FSEVEWPSPDRDDCITYSESGIVKITSLDGHAYLCLPRSQHEFTVHFLCKVSQKPDSS
                     VMPPETKNRVPKEELVGKTRNVCRSGRLSGQRLRNKENEPPRQLLTSKNASANIHCVS
                     ETEGREELPSPGTKRRYVHVWVKQSWSAASCPEEWKYPLSLGLRFYNKVPAASAADAE
                     VPVSGIVTSDNPEERGTGVSVLPRALLLSCSAPHMHRWNFCDSLLQRQSDAEEYSYPE
                     LIKVVWYKGVTYRLTHKNVNSIEIFPGDGSVFKSEGTHFGNYFTYSSQDNSGKREEKT
                     YSVNNLPPDRPGNLYSVRSLIKQATRILQHCAKIRLSLSHNYRVCCWRMAPGVNVSSI
                     LPVLLKESLIPGVGRFLAYSDDKVHAVFLDGVTLTLNWDLSSSAEKTQVDQGLRLRWC
                     RLTFPDGQDQLIQTEHPGVYERYVTSVVTWCRRLTQTSSRHVSPRLSPVPEENWSVAS
                     ELEKIQKFNWLLENSGVLNLTSGKKNEQCSSDHCKPGSSETLPEATNEESVSVALKRT
                     SEVLQDIDYLLSLTRK"
     exon            382..471
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            472..1118
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1119..1220
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1341
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1342..1433
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1434..1503
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1504..1674
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1675..1769
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1770..1865
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1866..1906
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
     exon            1907..2301
                     /gene="C2h5orf34"
                     /gene_synonym="RGD1306227"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggtagttaa tatattactt attgaaggaa ccgtggcgaa gcggtcgcag acagtacagt
       61 tcctgccact tgagcaaaat agaggtcggt cagaggctgt ggttgccctc ctttcgaagt
      121 ggaaaacaac ttcgcagccc acaactgccg tccctgctga gaagtgtggc gtacccaggc
      181 atgggaacgg cagctgaagt gcgaatggta ctgtacgagg atgactcagt ccaagtgaac
      241 tatgctgatg gttccacact gcagctctct ccttgcggct ctgaatttct ctttgaaaag
      301 gcacctcctc cttccacaca tcctttagaa caaccagaga ggattcgtca acggacacac
      361 tttgttatta gcaactaccg agagcaacta cagcgagccc tagattttcg aaactcttca
      421 gctacttgcc cttttttatc tgaaagcatc ataccttctg aaagaaaaaa gcgtgtcttc
      481 attgatttct cggaagtaga gtggcccagc cctgacagag acgactgcat cacgtactcg
      541 gagagtggta tagtgaagat aacgtcgctg gatggacacg cgtacctttg cctgcccaga
      601 tctcagcatg aatttacagt gcattttttg tgtaaagtga gccagaagcc agattcatct
      661 gtgatgccac ccgaaacgaa gaatcgggtc ccaaaagaag aactagttgg gaagaccaga
      721 aacgtctgca gaagtggacg tttatcagga caaaggttaa ggaataaaga aaacgagcct
      781 cctcgccagc tcttgacatc taaaaacgct tcagcgaaca tacattgcgt gagtgaaact
      841 gaggggaggg aggagctgcc ttcccctggc acaaagcgca gatatgtcca cgtgtgggtg
      901 aagcagtctt ggtctgctgc ctcctgtcca gaggagtgga aataccctct gtctttggga
      961 cttcgtttct ataacaaagt tcctgccgca tctgcagctg atgcagaagt ccctgtgagt
     1021 ggcattgtga cttccgacaa tcctgaagag agaggaacag gggtttctgt ccttcccagg
     1081 gccttgttac tcagctgctc tgccccacac atgcacaggt ggaacttctg tgactcactt
     1141 ctacagagac agtctgatgc agaagagtat tcctatcctg agcttataaa ggtggtgtgg
     1201 tataagggtg ttacatacag gctcacccat aaaaatgtaa actcaataga gatttttcct
     1261 ggcgatggat cggttttcaa gtcagaagga actcattttg gcaactattt cacatattca
     1321 agccaagaca actcaggaaa gagagaagag aaaacttatt ctgtaaataa cctacctcca
     1381 gacagaccag gaaatctcta ctctgtccgt tccctgatta aacaggcaac cagaattctt
     1441 caacattgtg ccaagataag gctttcacta agccacaact accgtgtatg ctgctggaga
     1501 atggcacctg gagtaaatgt tagcagtatc ctgcccgtgc ttctgaagga atccctcatc
     1561 ccaggcgtgg ggagattcct cgcctactcc gatgacaaag tccatgctgt ctttttggat
     1621 ggcgtcacac taacgctgaa ttgggatctt agctcctctg ctgaaaagac acaagtagat
     1681 caaggtctcc gcttacgctg gtgcagatta acttttcctg atggacagga tcagttaatt
     1741 caaaccgagc accctggagt gtatgaaaga tatgtgactt cagtagtaac atggtgcaga
     1801 agactaacgc agactagttc aagacacgtg tccccacgtc tctcacctgt tcccgaggaa
     1861 aattggtctg ttgcttctga gcttgagaaa atacagaaat ttaactggct gctggaaaac
     1921 agtggtgtcc tcaacctgac ttctggcaag aaaaatgaac agtgttcttc tgatcactgt
     1981 aaaccaggat cttcagaaac cttgccagaa gcaactaatg aagagagtgt atcagtagca
     2041 ttgaaaagaa cttctgaagt ccttcaggat attgactatc ttctgtcact cactagaaag
     2101 tgaaaaatgg cagtattaca aaatcttaag gatgtttcaa attactagta tggaattgct
     2161 aacccaagaa attgcaaatg ttacttctat agaatgatcg ttcagaactg atttcacttt
     2221 gattggattt tgctcagctt gtaaatttta gtgttcgtgt gtatatgcac tttttaaaat
     2281 aaaaaaaatt gaaattttga aaaaaaaaaa aaaaaaaaaa aaa
//
