LOCUS       NM_001009707            1173 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 4 open reading frame
            33 (C2h4orf33), mRNA.
ACCESSION   NM_001009707 XM_342240
VERSION     NM_001009707.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC088236.1.
            
            On Jan 13, 2005 this sequence version replaced XM_342240.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088236.1, FM077946.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132280, SAMD00132295
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q26"
     gene            1..1173
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /note="similar to human chromosome 4 open reading frame
                     33"
                     /db_xref="GeneID:361941"
                     /db_xref="RGD:1359508"
     exon            1..36
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
     exon            37..152
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
     CDS             153..752
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /codon_start=1
                     /product="UPF0462 protein C4orf33 homolog"
                     /protein_id="NP_001009707.1"
                     /db_xref="GeneID:361941"
                     /db_xref="RGD:1359508"
                     /translation="MDFKIEYTWDSFPVSHEPVRIRLNPCDKGLKMEVSAPFFNDPPA
                     PLGEPGKPFSELWNYEVVEAFFLNNTTEQYLEVELCPHGQHLVLLLSGRRNVWKKELA
                     LSFKVSRGETHWEGEAFLPWSYFPSKVTRFNSFAIHGSNDKRVYEALYPVPQPELQQG
                     QNPDFHRLEYFKPFSFNTLLGEEWKQPESDLWLIEKSDI"
     exon            153..333
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
     exon            334..394
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
     exon            395..446
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
     exon            447..646
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
     exon            647..1143
                     /gene="C2h4orf33"
                     /gene_synonym="RGD1359508"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccttccgc agtggcgcag cgagtgtctg tctgagaatt cctggtccct ccttctagat
       61 gcaggagtaa ctggacagag cctaagaggg agcccactac tcagacctgg gccagagacc
      121 acagctagca ccaaactaag aagagcttcc agatggattt taaaattgaa tatacttggg
      181 atagttttcc agtgagccat gagccagttc gtatcaggct gaatccatgt gacaagggat
      241 tgaagatgga ggttagtgct ccatttttca atgatcctcc agcccctctt ggagaaccag
      301 gaaagccttt cagtgaactg tggaattatg aagttgtgga agcattcttc ttgaataata
      361 caactgagca gtatttagaa gttgaacttt gtccacatgg acaacattta gttcttttac
      421 tttctggaag aagaaatgtt tggaaaaaag agcttgcatt atcattcaaa gtgtccagag
      481 gagagactca ttgggaaggt gaagcttttc ttccttggag ttattttcca tcaaaagtga
      541 cacgatttaa ctcatttgca atccatggat caaatgataa aagagtttat gaagcgcttt
      601 accctgtgcc acaacctgag ctgcaacaag gacaaaatcc tgacttccat cgtctagaat
      661 atttcaagcc tttcagtttt aacacactgc ttggagaaga gtggaagcag ccagaatcag
      721 acctgtggct gatagagaaa tccgatatat aggagtataa ccaaaagtgt cagtcatttc
      781 tcctctgtat cttttaaggt aatctaataa gatacatata cacatttcaa taacaatttt
      841 aacagagatc actgaaatgt tgtgcctctg tggcaaattg tatatggtga acaaagaaat
      901 agaaactctg tgtaacataa aataattttt acttaaatat cctctctacc cttgaaatca
      961 gtacaaaaca ataatttatt ttaattgatg agaccatctc tatctgctaa ggcatcaaga
     1021 tagaagagtt atctaactag atatttttac tgtgttggaa gaaatgaaat aatcttgaat
     1081 taaggaaatg gagttgatac ttttacttac aaataaatga tattttatta atgttgttaa
     1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
