LOCUS       NM_001271116            1163 bp    mRNA    linear   ROD 16-FEB-2025
DEFINITION  Rattus norvegicus allregulin (Arln), mRNA.
ACCESSION   NM_001271116 XM_001079712 XM_002726037 XM_003753658
VERSION     NM_001271116.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Anderson,D.M., Makarewich,C.A., Anderson,K.M., Shelton,J.M.,
            Bezprozvannaya,S., Bassel-Duby,R. and Olson,E.N.
  TITLE     Widespread control of calcium signaling by a family of
            SERCA-inhibiting micropeptides
  JOURNAL   Sci Signal 9 (457), ra119 (2016)
   PUBMED   27923914
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC100074.1.
            
            On or before Sep 3, 2012 this sequence version replaced
            XM_002726037.2, XM_003753658.1, XM_001079712.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100074.1, FQ213976.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1163              BC100074.1         1-1163
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q42"
     gene            1..1163
                     /gene="Arln"
                     /gene_synonym="ALN; C2h4orf3"
                     /note="allregulin"
                     /db_xref="GeneID:691807"
                     /db_xref="RGD:1594660"
     exon            1..312
                     /gene="Arln"
                     /gene_synonym="ALN; C2h4orf3"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..313
                     /gene="Arln"
                     /gene_synonym="ALN; C2h4orf3"
                     /note="uncharacterized protein C4orf3 homolog;
                     another-regulin; SERCA regulator ALN;
                     sarcoplasmic/endoplasmic reticulum calcium ATPase
                     regulator ALN; SERCA regulator ARLN"
                     /codon_start=1
                     /product="sarcoplasmic/endoplasmic reticulum calcium
                     ATPase regulator ARLN"
                     /protein_id="NP_001258045.1"
                     /db_xref="GeneID:691807"
                     /db_xref="RGD:1594660"
                     /translation="MEVGQAASGTDGVRERRGSSAARRRSQDEPVQSGMNGIPKHSYW
                     LDLWLFILFDLALFIFVYLLP"
     exon            313..1081
                     /gene="Arln"
                     /gene_synonym="ALN; C2h4orf3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggggcgtgg cgcctaagtg attggcgggg ctgtccggaa tcgattgcta agacgagggc
       61 gcgcagcggc cttcaggttt agtctcaggt gcgcggaaag tgaagcgacg tgaagatgga
      121 ggtgggccag gcggcgtctg gtaccgatgg tgtccgggag cggaggggct cgtccgcagc
      181 tagaaggagg agccaagatg agcccgttca gtcggggatg aacgggattc cgaaacactc
      241 ctactggctg gatctctggc tcttcatcct tttcgacctg gcgttgttca tcttcgtgta
      301 cctcttgccc tgattggttt gctgagagtc tagaacacgg ctggcttctg gagtgaatcc
      361 tgaaaactac tagacttctt gaatgaagag gacttccagg agctgaattc cagacctcca
      421 ggctttcctt cagcccttga cctccctaaa gtagtactat atgtttaaaa ccatgattgt
      481 agctaaatga tatataatat atatttttaa taatgcctgt aatttaagta ctttaaggaa
      541 atttatgtag catttactca tccatcgggt atccggcccc tttctattac ccaggcatca
      601 gttgggacac agcagtgaac atcagcaaaa aaaaaagtta tctttgtgaa gcttactttc
      661 tcagatattg ttttaaaact atgccattat aaaatagtta tcatctaggg ttgagtaggt
      721 agcatttatg cagaaaggct acagtcccaa agcagctacc ataaatattt tggaagctat
      781 tccttttcac cttaagatct gggtaattag agttttttat actgctggtt tcagtacatg
      841 agaactgcct aaaatattca gaggtggtgt tcttctccct tataattcac aatatttggt
      901 aaactgttga cagttgtctt aagatactgt tgcatttgct tggataattt tttgtgcaaa
      961 gtgtaactga agtatgtgta ttagaataca ggactggggt gacactgagt ttaccacact
     1021 ctgggacccg atttgtactg cttactaata ttctctaata aatgtttaat cactgaattt
     1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1141 aaaaaaaaaa aaaaaaaaaa aaa
//
