LOCUS       NM_001399811            2241 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus similar to human chromosome 3 open reading frame
            33 (C2h3orf33), mRNA.
ACCESSION   NM_001399811 XM_006232447
VERSION     NM_001399811.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Hao,D., Gao,P., Liu,P., Zhao,J., Wang,Y., Yang,W., Lu,Y., Shi,T.
            and Zhang,X.
  TITLE     AC3-33, a novel secretory protein, inhibits Elk1 transcriptional
            activity via ERK pathway
  JOURNAL   Mol Biol Rep 38 (2), 1375-1382 (2011)
   PUBMED   20680465
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 14, 2022 this sequence version replaced XM_006232447.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643297.7805.1,
                                           SRR26360186.2540698.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-147               JAXUCZ010000002.1  150553848-150553994 c
            148-207             JAXUCZ010000002.1  150552348-150552407 c
            208-355             JAXUCZ010000002.1  150550349-150550496 c
            356-516             JAXUCZ010000002.1  150536116-150536276 c
            517-2241            JAXUCZ010000002.1  150530231-150531955 c
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q31"
     gene            1..2241
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /note="similar to human chromosome 3 open reading frame
                     33"
                     /db_xref="GeneID:499630"
                     /db_xref="RGD:1565059"
     exon            1..147
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..918
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /note="uncharacterized protein C3orf33 homolog; chromosome
                     3 open reading frame 33 like"
                     /codon_start=1
                     /product="protein C3orf33 homolog"
                     /protein_id="NP_001386740.1"
                     /db_xref="GeneID:499630"
                     /db_xref="RGD:1565059"
                     /translation="MAPLPASLGSQASDRDRGEANVVTRMSQWADNHLRLVQNISTGM
                     AIAGIVLLIRSVRLTSKFTTSSDIPVEFIRKKVKLRGRLQRITECGLEIEHVPITLPF
                     ISSWKQEPCGVLLVKLAGVELTEAGKVWLQKELRPSQLLWFQLLGKENSELFCYLLVN
                     KGGYFNVNLNEEILRRGLGKTVLVKGLNYDSKTHWKIHRKLLKAELTALKKGEGIWKE
                     ESEKESYFRKLKDSWRERWTKDNDLKTAGPGLSATKEGHYDRFRRAYGSWKDNMGNYS
                     LVLKLREFVSRLHFRRKG"
     exon            148..207
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /inference="alignment:Splign:2.1.0"
     exon            208..355
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /inference="alignment:Splign:2.1.0"
     exon            356..516
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /inference="alignment:Splign:2.1.0"
     exon            517..2241
                     /gene="C2h3orf33"
                     /gene_synonym="C3orf33l; RGD1565059"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccaccagg gggaacccgc tggacgccgg aacatggcgc cgctgcccgc gagcctcggg
       61 tcgcaggctt ccgaccgcga ccgaggggag gccaacgtgg taacgcggat gtcgcagtgg
      121 gcggacaacc atctgcgtct tgtccagaac atcagcactg gaatggccat agctgggata
      181 gtgttactaa taaggagcgt tcggctgacg tcaaaattta caacctcctc agatattcca
      241 gtagaattta taagaaagaa agttaaacta cgtggccgat tacagcggat aactgagtgt
      301 ggtctagaaa ttgaacatgt acctattact ttacctttca tatcttcatg gaaacaagag
      361 ccgtgtggag ttttgttggt taaattggct ggagtagaac tcactgaagc cggtaaggtg
      421 tggctacaga aagaactgag accttcccag ctcctgtggt tccagctcct tggaaaggag
      481 aattcagaac tcttttgcta cctcttagtg aacaagggtg gatattttaa tgtgaatctg
      541 aatgaggaga ttttgagaag aggcttgggc aaaaccgttc ttgttaaagg gctaaattac
      601 gactcaaaaa cccactggaa aattcacaga aagttgctta aagctgaatt gacagcctta
      661 aagaaaggag aaggaatctg gaaggaagag tctgaaaaag aaagttattt tagaaaattg
      721 aaagattcct ggagggagag atggacaaag gacaatgatt taaaaacagc cggaccgggt
      781 ctcagcgcca ccaaagaggg tcattacgac aggtttcgca gggcttacgg aagctggaag
      841 gacaacatgg gcaactactc tttagttctg aaactcagag aattcgtgag ccgcttacac
      901 tttcggagga aaggatgaac ctccatgaag tctggagtgg ctctccctga agagtgccct
      961 ggagctgtga gagcactttt catttgactc aaaatgggaa ttacctcagg tgatcataat
     1021 ccccgtctcc tggtacttac acattatagc cattgttaac atcagcatca atgaaagaat
     1081 ggcacactgt gaatgttacc cggtagaagg atgtacatat tgtagaactt atgttttgcc
     1141 tttatctttt cctccctgcc ccctagtgcc atgaattgaa ctcagggtct caggcactct
     1201 ggtctgcagc acaccattac tgagttttat taccaaccct acagtggtaa tgtctgaaga
     1261 gtaagtttaa gtattgactt ctattagtgg tttggggcag cccatattta acatttgttt
     1321 ttcaatttta tcaactttat aataaaggaa ttttttttaa aaaattttct ttctgaggtc
     1381 actctttttc ttcaagcatc tttccagtta ctcctgaatt aggaccactg atccaagagg
     1441 tacagccacc attcctcata ataaatgcag ctaatttcat tctgttctta gataagagga
     1501 ttgcccttaa gacaaagatg agaaggacaa cccagaggac agaaaggaag gatctttagg
     1561 acatcacgga gcccctgaac tcaccaattc ttgaactacc ctgccttcca actcctaagt
     1621 acccaagaga gtaaactgct ttgacagtaa ggttagtttc aagttgggtg tggtggcacc
     1681 acctgtaatc ccagcacttg gtaagtacag actggaggag aagaattcaa ggttatccct
     1741 ggttcatact gaattcaaaa ccagtttgag ctaattagta tgagacttta tctaaaaatc
     1801 agaaataatg aaagcaaaaa cacccccaaa ccactttaag gtatgcatta aaatcttcct
     1861 gacaaagtaa gcctctttca caagcccaac agtagtttgc ttactgtttc gacttggtct
     1921 aacaatggag tccttcgagg gaaattctga atgcttgtga gaaaactcca agaaaacaag
     1981 agtcttgtga cctaagtttc ttcaaaaaca caaaattgtg tataaaatgt gctttcgtgc
     2041 ccttcccagg tattgcagat aggagtgagc tcactccaga gtattcatta caactggata
     2101 gcgttacttg tttatatgcc tctttggaaa aacatgtttt tgccacatgt ccttgtgatt
     2161 gtaaacttta ctcaggtgac ttttcttaac ccccagagta taaattgtct gaggctctga
     2221 ataaaattgg ctattgcatg a
//
