LOCUS       NM_001395135            1551 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            52 (C2h1orf52), mRNA.
ACCESSION   NM_001395135 XM_006233461
VERSION     NM_001395135.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jun 4, 2021 this sequence version replaced XM_006233461.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2518804.1,
                                           SRR22399489.2092040.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-317               JAXUCZ010000002.1  237513711-237514027
            318-516             JAXUCZ010000002.1  237514569-237514767
            517-1551            JAXUCZ010000002.1  237519312-237520346
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q44"
     gene            1..1551
                     /gene="C2h1orf52"
                     /gene_synonym="RGD1560065"
                     /note="similar to human chromosome 1 open reading frame
                     52"
                     /db_xref="GeneID:499724"
                     /db_xref="RGD:1560065"
     exon            1..317
                     /gene="C2h1orf52"
                     /gene_synonym="RGD1560065"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..590
                     /gene="C2h1orf52"
                     /gene_synonym="RGD1560065"
                     /codon_start=1
                     /product="UPF0690 protein C1orf52 homolog"
                     /protein_id="NP_001382064.1"
                     /db_xref="GeneID:499724"
                     /db_xref="RGD:1560065"
                     /translation="MAAEEKDPLSYFAAYGSSSSDSSDEENSEPEDAGRKEAAPAPTT
                     GGRGKQAEKRLPGPDELFRSVTRPAFLYNPLNKQIDWERHVVKAPEEPPKEFKIWKSN
                     CVPPPETYTAEKKPPPPELDMAIKWSNIYEDNGDDAPQNAKKARLLPEGEETVESDDD
                     RDERASKTRRVEPGEAAKKKK"
     exon            318..516
                     /gene="C2h1orf52"
                     /gene_synonym="RGD1560065"
                     /inference="alignment:Splign:2.1.0"
     exon            517..1551
                     /gene="C2h1orf52"
                     /gene_synonym="RGD1560065"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggcttccgg cttccggccg agagggtggg aacccgcagc cgtcatggca gctgaagaga
       61 aggacccgtt gagctatttc gcggcttacg ggagcagcag ctccgactcg tcggacgagg
      121 agaacagcga gccggaagac gcgggtcgca aggaggcggc cccggctccg acgacgggcg
      181 gccgcgggaa gcaggcggag aagcggctgc ccggccccga cgagctattc cgcagcgtga
      241 cccgcccggc cttcctctac aacccgctca acaagcagat cgactgggag cggcatgtgg
      301 tgaaggcgcc ggaggagcct ccaaaggaat tcaaaatctg gaagtccaac tgcgtgccgc
      361 ccccagagac ctacactgct gagaagaagc cgccgccgcc agagctggac atggcgataa
      421 aatggtcgaa catctatgaa gacaatggtg atgatgcccc acagaatgct aagaaagcca
      481 ggcttctgcc ggaaggggag gagacggtgg aatcagacga tgacagagac gagcgtgcat
      541 ccaagacccg cagagtggag ccgggagagg cagccaagaa gaagaagtag agacggtggc
      601 tcctgggatg tgccgttggg cggagtgttt gctcttgtgc gttactatga cagacatctc
      661 catgaacgtt ttatgttgat gaactaacga gtatcgtctc aagactttcc actgtagaat
      721 tcactttttt atttaaaacc tgtatgtatt tacaactcta atggtgacct gtgattgtga
      781 actgacagta cttggaagca ttctggctat cacaaaattg gtgacaggct ttgagagttt
      841 gtcacatgga catgccaatg ttctatgaac cttttataaa ggattatatt tttaaagtaa
      901 atatattgta ttgtactgtg aacttgtggg tgcttttcat tagtgtctgt acagtgtaaa
      961 tagatgatca tggaaataaa attacttaac tcagcattgc tattaactga atgccactaa
     1021 ccagtatttg tgacaagcga cctgcttgcc ctgtgacatt ttaattcaca gtggtgattg
     1081 gctgtaggga gagcctccca tgttcaggtg ccttgtgcat tcttctctcc aaccatcctg
     1141 taaagaaagt agacattcga gtcctcagtc ttgtgatgag agcttgagga gctgggcaga
     1201 gggatacgca gcagtgagtg aagactagca gtccctctgg ccggacccca gaatcggacc
     1261 aaacacctgt ccactcatca gacttcaatc attttccagg aacgtcgtct ctcccgtgtg
     1321 cacttctgta ggggaggtct cctcataccc tgattatgcg gctgcacttg ttgtatctgc
     1381 cttacaatgt gcttagtcac ttcttcctta aatatacggg aggcagacca ggctcttcta
     1441 tgaaagatga ccagaatcag caaagagcat aaggcatcca gttaggtttg agtctgtgtg
     1501 agtatatgtg atataagaga cacattaaaa accatttcaa ttccaattta a
//
