LOCUS       XM_039103820            3946 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 1 open
            reading frame 162 (C2h1orf162), transcript variant X2, mRNA.
ACCESSION   XM_039103820
VERSION     XM_039103820.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3946
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3946
                     /gene="C2h1orf162"
                     /note="similar to human chromosome 1 open reading frame
                     162; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 ESTs, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 59 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100363228"
                     /db_xref="RGD:2323412"
     CDS             910..1296
                     /gene="C2h1orf162"
                     /codon_start=1
                     /product="transmembrane protein C1orf162 homolog isoform
                     X1"
                     /protein_id="XP_038959748.1"
                     /db_xref="GeneID:100363228"
                     /db_xref="RGD:2323412"
                     /translation="MGLREKKVSWLWAPKAKCLFSSSGWEQAPSAQPIKEHLILAFFA
                     GVLLTLLLVILTLLIKSCRKCNSSAQTRYPHSEPPTKLSSISKESLTYASMTFKSSEE
                     NSNDLTRNHSSGLDPTVYSQIKVTDP"
ORIGIN      
        1 agaaatgacc tttcctgggt cttctggcat tcatgtgtga aagtgtaaac aagcaaccct
       61 cattgcttac aggaccttta gaaatgtagc acagggtggg gctatggctc cggtggtaga
      121 gtgcttccct agctttcatg aagatctggg attaatccca gtaccgcaca aaccaggcat
      181 actggttcag actgtgagcc tagcatgcag gagttggagg caggaggatc aaaaagtcat
      241 tatcatccac aggaggtgga gaccagccta gtctctgtga gaagagagtc aatctaaaaa
      301 gaaggaaatg agggaaaggg gaaaaaatat cattggcctc aaagaggaag tcagtgcctt
      361 ggaggttgaa catatctttg caacacagct tgagggtgac agtgacatca tctctgaaaa
      421 ccaagactag gaacagaaaa gtcaaaggct aagtctcaga gctgcacctt aaaactggaa
      481 ctttcctgaa aaggaacaat ctccacggca gccccagtga ccagttctac accctattcc
      541 ttcaaaccca agtaaaggaa tacacttatc cggtctttgt ggcatttcca gtccattgga
      601 gggctttttg ttgaccattt tgtcttggga ccttgggaag gacagtctga gtgggagaag
      661 agatcaggaa tggtgaaaga actcagtgtt tgatcttaag agtataatag ttctgttttg
      721 ttttgttggc aggggagggg gattgagcac atctcacaat gtggccccgg ctggcctcca
      781 aattgccaca atcaccctgc ctcggcttcc caggcgctgc gctacaagca gtatgaactc
      841 aacattgccc aagatttgag agatccccac tccacacttc acacagtgct ggggtgtggg
      901 gtattgggaa tgggattgag agaaaagaaa gtctcatggc tgtgggcccc aaaagcaaaa
      961 tgcctctttt ccagcagtgg gtgggagcaa gccccgtcag cccagcccat aaaggaacac
     1021 ttaatcctgg ccttttttgc tggggttctg ctgacactgc tccttgtgat ccttactctc
     1081 ctcatcaaga gctgcagaaa atgtaactcc agtgcccaga cccggtaccc tcactcagag
     1141 cctcccacca agctgtcatc tatatcaaag gagtcgctca catatgccag catgactttc
     1201 aagtcctcag aagaaaacag caatgacttg actagaaacc actcctcagg cttggacccc
     1261 actgtctatt ctcagattaa agtgacagac ccatagctgc ctctccaatg aggcagaatg
     1321 caggacctca gctcagctcc ttcgacatgc tgctttcttg ttttgttccg tatgtttgct
     1381 tttgctgttt tccacaaact tgcgaccaca gtctatataa agttgccact ggagtgattt
     1441 aggcttgatc tagtgcagtt gctgtcagtc ataaggacca gtggttagtg actttccctg
     1501 acagaggaaa ggtgtcagtc ataaggacca gtggttagtg actttccctg acagaggaaa
     1561 ggaggctgtt gctttcactc ggtagcagcc cctttaggga caacacccct aaacttttcc
     1621 aaagggggga tagagctcaa gataaagaag cacactgatg atagccaggg aggagccaac
     1681 cctaataaac agttgaagag ttacaaataa tggcagaccc tcctccaagg ttggtccctt
     1741 cttagttgtc atcctgtccc tttatgttct ccagaaatca aggtcagaat gctaagtcaa
     1801 caccaagtac gtttgtgtaa aacactgcta aaatgtgggt ttctatctcc tttgtatggc
     1861 attagagctt tgaatcacaa ccttggttga aaatcaaaag gagagattaa acatgttcat
     1921 ttatttcccc caaacaaatg gacaatcata tagactgccc caagaaaaaa acagcaagat
     1981 tcttcttaat tatgcaagct taatctaaaa tgtaagcact aagcaagaag aaaacatctg
     2041 taaaataaac ctaagtgcta ttggggtaga gaaggacatt tgctaccaga cttgacaacc
     2101 tgagtttaat cctgggtctc acatggtgga aggacagaac tgactcaaga aagttgtcct
     2161 ctggccttca catttactct gcggtgtgtg tgcataacat agtacacaaa catgcatata
     2221 cgcgtgtgtg cgggttcaca cacacacaaa taatacatac acacatacat acatacatat
     2281 atacatacat aaatacatac atacatacat acatacatac atacgaaccc ataactatta
     2341 tcacagtatt aagacctgtg caatcccagg catggagaga tgaattgggc acatagtcct
     2401 acccctagct gaagaattat tagcaattat tagacacttt tctccaagaa tatagtccct
     2461 ggtaaattga ctatatataa attcaataca tgaccactgg gcaagactga aatttgccag
     2521 tagcagaagg agaatgcttt ggtgggggcg ggggggaggc gtgtttgaaa ctcaaagaag
     2581 aataaaaact acaaggaaac atgcaagtat ggcatgtaga cccttgccct ttccctcaga
     2641 ctgctgaggt gcttggagtt ccctccctag agaacggagt tggggctgaa cctgaactat
     2701 ggtcatcaga gacatttcaa gagccctgat ctaatctgac aagataccga atctaatcag
     2761 cgcccaaact tcactccaac cccgttcaca cagggctggg gactcgagga ttctgggctg
     2821 agcttactcc ttcttagaag ggagcaaggc acagcaaatt gtgtgctgct gagactaaga
     2881 aaatgcctcc atcagtgaaa ggctcacctg gcaggagcaa gaacctgact ttgaatcccg
     2941 ggacccatgg gaaaatgtgg ggcatactgg tgaatgcttg taatcatagc gctggagagg
     3001 cagagacagg aggatccctg gctctcattg tccagctagc ctagcttaat cagcaaggtc
     3061 caggccaatg agagaccctg tctcatataa agtggacagc tcctgaggaa tggcatctga
     3121 ggttatcctc cagcccctac atgtccaagc acacacatga atgcacttct cccacagggt
     3181 agcagggttc ttatgaggtc agtgatgtca gtgatgaaac aggagggatg ccatatggga
     3241 agatggtcag cttgcagggg agtacgtgcc atagtggcaa tcctgtttgc tcccacagat
     3301 gacgcctcat tctggccttg ctcttcctga ttgaaaaaca cttgtcattt gtcacctttt
     3361 tgttgctcat tggtcaaaag cagcacccac ttacactggt gacagttcct cattggggat
     3421 gtgctttggg gtccagagtc tttccaccaa gagaatataa gaaccacaga ctccatcgat
     3481 cttctatttt gggataaaac atttgatact gactcagaaa tgcgttggaa tattatgctg
     3541 tttaggaaca tttcaataaa tacttttcca ataataacta ggagaatcca gtgattctcc
     3601 taggggtgaa ttttcaacaa tattcagata tttattggct agtaaataaa ataaataagt
     3661 catttccctt tgtcccagat tctgtgacct cttcttcact gtagctaatc taatgcatga
     3721 gagctaagat ttggagagat tattcaatgg cagccttcct ccaaagatct tccgagcctc
     3781 actgttgcca tcggccataa aagattgctg caaggtcaca gagtccttta gaaatcctga
     3841 aaggtcagag tcagtctctg agatgcagac cagttggcat ggagagtcta ctgtaatgat
     3901 atcactttat ttaggagcta aatgaaataa atcttcagtc acacgc
//
