LOCUS       XM_039082487            3135 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus C2 calcium-dependent domain containing
            4B (C2cd4b), transcript variant X2, mRNA.
ACCESSION   XM_039082487
VERSION     XM_039082487.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3135
                     /gene="C2cd4b"
                     /note="C2 calcium-dependent domain containing 4B; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 4 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:108351734"
                     /db_xref="RGD:1591932"
     CDS             1929..2951
                     /gene="C2cd4b"
                     /codon_start=1
                     /product="C2 calcium-dependent domain-containing protein
                     4B"
                     /protein_id="XP_038938415.1"
                     /db_xref="GeneID:108351734"
                     /db_xref="RGD:1591932"
                     /translation="MRLLGRLRSSTPEPAFSNVLTPGRIPEFCIPPRLPVPDAPESPL
                     PAASLPWRCAAEPDLWPRTHDGRENGDEDGAGLTDWDPRSQAALSLPHLPRARTVYGF
                     CALLESPHTRRKESLFLGHPGTPRLGFRHRAHTCAWQRRASDSELAAPRDLDTAPSVA
                     PVPHVRRLLRAPDGLLSRALRVPRGRATARPGSRGDERERAASCAPPAPTGPDPERLQ
                     AEANVALGRGGCTLRLAAEYCPRSACLRLRLLRAEGPAAELEPRALGCRLSLVLRPSG
                     QQRASVVRRSRKAALDQDCCFDGLPEEQLRRLAVRIKAESKGRGLERRRPLGQGELLL
                     GSLLLL"
ORIGIN      
        1 actgctgcca agattgaact gtttgttgca cagctatata gtcttgtggt gacagtggct
       61 ttagagtgag tttaggtagg agctgtgcaa actctgttaa ataatcccac ggactcatct
      121 ggtggccttt tggagcaatt tttgtaaaaa aatttcaaac ctgtcacagg aaagggatat
      181 taaatgggga catatagtca tcggtcagca cttggcttga gttgacaact ccatagatac
      241 catctctgga gcacgaggct ggagatttta gccaggtttt tctgacaaga gagctgtcat
      301 gccttctgcc ccttgagtta tctcacattg ttgcccagag tcaacaaagt aacgctctcc
      361 aagggtctat agctttaccc tacactgccc agctcccgtt cttagttcac agggttctgc
      421 caagccctag ggaggaaccc agaggtttct ccataaccca tttcccttct cctttttcta
      481 tccaatccct ctccttgtgt aggagaggta tcctttctag acaggaagaa agaggaaaat
      541 tctccaagtg actcttaagt cactttgaca tcattaaaga agtcattgta acaagactaa
      601 catgaggttc aagggtaaac taaagaacta cagaacttag gttgctgggg aaaacttcct
      661 tttgttctct agggctggta cagagcctgc acaaagtttt gaagtgtgag acagtcatgg
      721 gagccttaag ttcatacgct gtgtggaact ttggtcttct gctgatagag tgccacaccc
      781 atgtgggaac ctgggttcac gttctgctat cgtacaggct acgtcctctc tagctgagaa
      841 cacggatggg aagcagtaag cctctgagcc cagatgagct ctcagaaggc tctcctagca
      901 gtagccagct ctgtcggagg tcatgctatg atcagaaagt ggggtggaaa acacagtgtg
      961 gctgtggcgt gaaccccaag ttatttattt ttcgtgttat gtgttgtctc atggcccttg
     1021 ctgtcactca aaggacacag ggctgacctc tttggagcaa caggacagac aagtcaagtc
     1081 actgactgct gcccatcctg tgacactaca aagacccttg aaagggtcag tttctacgtt
     1141 gatgctgtcc tctgtgaagc gactgagtag ctcacagcta tggtgaagag agaaccttga
     1201 accccagaac caacctgtgt gccttgctgc tgctgctgct gctgctgctg ctactggcag
     1261 gcttggattc tgaaagcgta tgcttagacg ctcgcaatcc acattccgcc ctgggacaga
     1321 ctcttcagag catgtggtcc ttcagagaga gaacctggtc acaggacaga gcaccacgac
     1381 tcatccgtct gtgtagatga tgtggtctag cttctctggg aagcagccat gcagatgcct
     1441 gaactcaagt cccattgcag aagatgagct accaccacca accagagatc cagacaaggg
     1501 cctcaggacg tgatacctgg aagtttttct ggcatgggca ggagtgtggg cgagggcagg
     1561 gtgacaggat gacctttact catctgcagc atttcccagg cctgtaagct gcgttccagc
     1621 aaagctacag ccaatatagg tcccagagcc cggtcctgcg acacctatag agcgagctgc
     1681 tggtgacttg gtgggagagg accgaaaggc gggctctatc tgttaccttt tgggattggc
     1741 ctcttggcac ctgggcgtga ctcgagctaa ggtataagac aggagcgcca ctgtctcctg
     1801 ctgcagtgct gaaggcggag ccctagctgc gagttagacg tcacctgctt tgatcctgca
     1861 gtcggaccca acgagcctga agaagaacag gcactcgtat ccgccgcgct ccggcacaaa
     1921 ctaaaaggat gaggcttctt ggtcgactcc gctcctccac tcctgagcct gccttttcca
     1981 acgtgctcac cccgggccgc atcccagagt tctgcatccc cccgcggttg cctgtgccgg
     2041 acgctcccga atcaccgctc ccggccgcct cacttccttg gcgctgcgcg gccgaacccg
     2101 acctatggcc acgcacccat gacggccgtg agaatggtga cgaagacggc gcgggcctca
     2161 ccgactggga cccgcgctct caggctgcgc tctcgctgcc gcacctgccc cgggcgcgca
     2221 cggtttacgg cttctgtgcg ctgctcgaga gcccgcacac acgccggaag gagtcgctct
     2281 tcctcggcca ccccggcacc cctcggctgg ggtttcgcca ccgtgcgcat acctgcgcgt
     2341 ggcagcgccg agcctcagat tctgagctcg ccgccccgcg cgatctggac acagccccat
     2401 cagtcgctcc tgtgccccat gtgcgccgcc tcttgcgcgc tcccgatggt ctgttgagcc
     2461 gcgcgctgcg ggtcccccgc ggtcgggcca ccgcgcgtcc cgggtcccgg ggcgacgagc
     2521 gcgagcgcgc cgcctcctgc gcgcccccag cccccaccgg cccggatccc gagcgcctgc
     2581 aggccgaggc caacgtggct ctgggccgcg ggggttgcac gctgcgcctg gcggccgagt
     2641 actgtccgcg cagcgcctgc ctccgcctcc gcctactgcg cgctgagggc ccggccgccg
     2701 agctcgagcc ccgcgccctg ggctgtcgcc tcagcctggt gctgcggccg tccggccagc
     2761 agcgcgccag tgtggtccgc cgcagccgca aggccgccct ggaccaggac tgctgcttcg
     2821 acgggctccc ggaggagcaa ctgcgccgcc tggcggtgcg catcaaggcc gagagcaagg
     2881 gccgcgggct ggagcgcaga cgaccactgg gccagggcga gctgctgctg ggctctctgc
     2941 tactgctctg agcgcggctt ccctggcgtc ctggacacct aaggccactt ggccatgaga
     3001 tgcacagaga ctcttggccc taggacactc aaggcctctt ggactctgac agtgacgtgg
     3061 ccctgggtca cccacagcct tttggctctg gtacactttc tcttttgtac aaaataaaag
     3121 ttatttattt tccta
//
