LOCUS       NM_001014025            1739 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 10 open reading frame
            88 (C1h10orf88), mRNA.
ACCESSION   NM_001014025 XM_219322
VERSION     NM_001014025.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Yang,X., Yang,J., Li,L., Sun,L., Yi,X., Han,X., Si,W., Yan,R.,
            Chen,Z., Xie,G., Li,W., Shang,Y. and Liang,J.
  TITLE     PAAT, a novel ATPase and trans-regulator of mitochondrial ABC
            transporters, is critically involved in the maintenance of
            mitochondrial homeostasis
  JOURNAL   FASEB J 28 (11), 4821-4834 (2014)
   PUBMED   25063848
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083846.1.
            
            On Apr 20, 2005 this sequence version replaced XM_219322.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083846.1, SRR8487226.68813.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760494 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1739
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /note="similar to human chromosome 10 open reading frame
                     88"
                     /db_xref="GeneID:309029"
                     /db_xref="RGD:1305014"
     exon            1..166
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /inference="alignment:Splign:2.1.0"
     CDS             3..1337
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /EC_number="3.6.1.3"
                     /note="uncharacterized protein C10orf88 homolog; protein
                     associated with ABC transporters"
                     /codon_start=1
                     /product="ATPase PAAT"
                     /protein_id="NP_001014047.1"
                     /db_xref="GeneID:309029"
                     /db_xref="RGD:1305014"
                     /translation="METAIEDAGLDRGPTLTSSWDAACGALTQSLFLTRTGPRAQDLD
                     FEQLLAPPAQGPDLVSLKSSLSPRDENPCFIYLKCGPNGGEEILSVGILSSARNMEVY
                     LGEEYCGTSRGKNVCTVLDNSEHEKILLYKKYLKLESPTHACKIKLLSFGEEQCVLIS
                     KVVVHLRPRSAKPSPSSPALGSRIDLDNIQTIMESMGSKLSPGAQQLMDMIRFQQQNC
                     LPIRDQLQSVLGTAGHKHLMALQSSPSSGVVDKASSTPFPFRTGLTPSAITENLKALI
                     DKSTQPSGEGNTTNHNECHLMPQNHSLESDLKNAVSSFLPKKASGSSSVPNSELLPFL
                     QNLCSQVNHLRVGHNARWQENVSKPREGTVGVPLEEQPVCSYLEKILSKNMEVMEKKL
                     MKHIDERIYQLQEHIDAKMALLVDLLRSPNSPSPGMPLRHYDSRERLSNGER"
     exon            167..370
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /inference="alignment:Splign:2.1.0"
     exon            371..443
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /inference="alignment:Splign:2.1.0"
     exon            444..650
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /inference="alignment:Splign:2.1.0"
     exon            651..1102
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /inference="alignment:Splign:2.1.0"
     exon            1103..1711
                     /gene="C1h10orf88"
                     /gene_synonym="PAAT; RGD1305014"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaatggagac cgcgatcgaa gatgcgggac tggaccgcgg accgacgcta acctcgtcct
       61 gggatgcggc gtgcggggcg ctgacccaaa gtctatttct tacccggact gggccacgtg
      121 cccaagactt ggacttcgag cagctgctgg cgccgccagc tcagggcccg gatctggtga
      181 gtctgaaaag cagcttgagt ccccgagatg aaaacccctg cttcatttac ctgaagtgtg
      241 ggcctaatgg gggtgaagaa atcctttcag ttggcattct gagttcagca agaaacatgg
      301 aagtatactt aggagaggag tattgtggaa ccagtcgagg caagaatgtc tgcactgtcc
      361 tggataacag tgaacatgaa aagatcttat tgtacaaaaa atacctaaaa ttggagtctc
      421 ccacacatgc ctgtaaaata aagttgttgt ccttcggtga agagcagtgt gtgctcatca
      481 gtaaagttgt ggtgcacttg agaccaaggt ctgcaaagcc ttcaccaagc tctcctgctc
      541 tgggatcacg gatagacctc gacaatatcc aaaccataat ggagtccatg gggtccaagt
      601 tgtcccctgg agctcagcag ctgatggata tgattaggtt ccagcagcag aattgtcttc
      661 ccatcaggga tcagcttcag tcggtgctgg gaactgcagg acacaagcat ctgatggcgc
      721 tgcagtcttc accgtcttca ggagtcgtag acaaggcgtc ctctacacct tttcctttta
      781 gaactggatt gacaccttca gccatcactg aaaatttaaa ggctcttatt gataaaagca
      841 cacaaccgtc cggagaagga aataccacaa accacaatga gtgtcacctt atgccacaaa
      901 accattccct tgaaagtgat cttaaaaacg cagtgtcttc tttcttacca aagaaggcaa
      961 gtggcagctc aagtgtgccc aactctgagt tgctgccttt tctccagaat ttatgtagtc
     1021 aggtcaacca cctccgtgtg ggacataatg ccaggtggca agaaaacgtc tccaagcccc
     1081 gagagggcac tgtcggtgtt ccgttggaag aacagcctgt ttgctcctat ttggaaaaga
     1141 ttctttctaa aaacatggaa gtcatggaaa agaagcttat gaagcacatt gatgagagga
     1201 tctatcagct ccaggaacac atagacgcta aaatggcttt gttagtggac ctgctgcgaa
     1261 gccccaactc tccgtcccca ggcatgcctc taagacacta tgactccaga gagagacttt
     1321 ccaatggaga gagataagct gtgcaataca cttattacag atatttatta catatttatt
     1381 acaaagccag aatccaaaaa ggttatgaaa gtcgtcttca gtgtcctttg aaggccgccg
     1441 tcttccgtga agtgacctca gtgctcgttt gcattgcgct tgttcctgta gattgaggtc
     1501 tgtgccagca cctgtcctga cctggtctct agttactctg cttgcaagac ttctcactct
     1561 tacaaaaatg tgtgcttgtt gctcaactgt ttcagatgtt taaggacttc taacagtttg
     1621 ttagtttgta ttgtatacta cgtgtgtttg aagtgaattt tttatttatt cagatacctg
     1681 taaaatatag tctcaggagt atgaaaagta aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
