LOCUS       NM_001305277            3715 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 6 open reading frame
            62 (C17h6orf62), mRNA.
ACCESSION   NM_001305277
VERSION     NM_001305277.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3715)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1 and BC085940.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085940.1, SRR26643293.71909.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840108, SAMN12840129
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1326              JAXUCZ010000017.1  40694549-40695874   c
            1327-3513           BC085940.1         1-2187
            3514-3715           JAXUCZ010000017.1  40684236-40684437   c
FEATURES             Location/Qualifiers
     source          1..3715
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..3715
                     /gene="C17h6orf62"
                     /note="similar to human chromosome 6 open reading frame
                     62"
                     /db_xref="GeneID:100911664"
                     /db_xref="RGD:6491729"
     exon            1..1956
                     /gene="C17h6orf62"
                     /inference="alignment:Splign:2.1.0"
     CDS             1828..2517
                     /gene="C17h6orf62"
                     /codon_start=1
                     /product="uncharacterized protein C6orf62 homolog"
                     /protein_id="NP_001292206.1"
                     /db_xref="GeneID:100911664"
                     /db_xref="RGD:6491729"
                     /translation="MGDPNSRKKQALNRLRAQLRKKKESLADQFDFKMYIAFVFKEKK
                     KKSALFEVSEVIPVMTNNYEENILKGVRDSSYSLESSIELLQKDVVQLHAPRYQSMRR
                     DVIGCTQEMDFILWPRNDIEKIVCLLFSRWKESDEPFRPVQAKFEFHHGDYEKQFLHV
                     LSRKDKTGIVVNNPNQSVFLFIDRQHLQTPKNKATIFKLCSICLYLPQEQLTHWAVGT
                     IEDHLRPYMPE"
     exon            1957..2133
                     /gene="C17h6orf62"
                     /inference="alignment:Splign:2.1.0"
     exon            2134..2256
                     /gene="C17h6orf62"
                     /inference="alignment:Splign:2.1.0"
     exon            2257..2391
                     /gene="C17h6orf62"
                     /inference="alignment:Splign:2.1.0"
     exon            2392..3715
                     /gene="C17h6orf62"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtccttccc tccgtcgccg cccggggcgc cgagcccgac tatggggccc aggtgggggc
       61 tgagtggcgg cagcagcgcg cgcggcccgg ccacagagcg cagcgcagcg ggcatggagg
      121 ggctccgtcg gcccgtcgtg ttctcttgac atggctcccg cccgcgccac gagcagcgcc
      181 cccgccgccg ccgccgcctc ctcctccgca gccgccgctc cgcccgcagg ctgcggctag
      241 acggcccacc gacggtcggc ctgcgagtcc cgctctcctc tccgcgggga ccccgccctg
      301 ccgcctagat cccggcctct gcccccttgg gaaaccaccc agccgccccc actcgggaaa
      361 catgggctgt tgaacgggaa aagcgaatcc agaacccggg aacttcattc ctttcttttt
      421 tggggtggga gggtgggctt cctttaagaa gtaattctta ttaacacgat tattttcttc
      481 tttcccctcc tcccaactga tccttcccac ttactctctt cccgcctcct ctacccgggc
      541 gggaatcgtt tccacgttga aatgagtgag aacccgagtg atccagtgtc tcccgtggtg
      601 cgagcgagtc gctgccgctg aaggccaggg gttgggggtg ggacctgggg gtcgaaggca
      661 ggtgattccc cgggcccagc ctgggacgtg ggagaacccg ccacctttgc ctcagccatg
      721 ctcacacgaa gataatcgaa ctccctacca tcccgaacct gaacagggtc aaatttaata
      781 cggagggctc cccggggaat gtagaaccca ccgcagggct aagggtgctt ggatcccggg
      841 cattaatcag ggctaatcac agagccggaa taactattaa taccatttaa tagacccccc
      901 tttccctctg ccatcatggt tctccttggc agcagcgttc gcagccgcct gagggtgaaa
      961 acgtgggtga tggggaagtt ggtaatgact ccgctgtttt ttctcatgac tcctttgggc
     1021 aacagctgtc cacccccggt atacactgta gttgattgca gggaaaccct gtacctctcc
     1081 ccttctttct ctgctgattt tgcacttttc tctttgctca ccaccaagtg taatcaatag
     1141 caaaacactg acagtacata gcagtagtga aatctgaaat aactaagaat taatcaggta
     1201 ctacagccat ggatctggct gggtaaaatc caactgggga tttcagtttc attcacctac
     1261 cctgttttgg tggtttttag ttttgttttt ctttttttct tttgtttttt ttcccccttt
     1321 tcctatattt gggaagcaac atcacaattt tccctccctt ttctcaattt tttaatccct
     1381 tttctgaaaa gggggaaaaa tccggatgga tttcacggat tggactggtg tcagctgtgt
     1441 tttactgcac acctaaatcc tgatgatagg tttttcattt tcccctcaat gccttttatt
     1501 ttggcagttt agccacatgt gttttccaga aagttagttc caagtttttt ctcctctttc
     1561 tttccttccc ttcccctttc ccatctaacc ctcaaacatt attgtccaaa catgactgga
     1621 cagcaacttt tgtttcttga ccctgtggta tgacagtctg ctaatattgc cagaaggtgc
     1681 agtttggggg ttacagttgt gattttagct attcaatcat attagcagga aaaaaatgac
     1741 ttgtttctgt tgtacttgag tcttaagaaa aagtgcccat agtttagtga caatttccaa
     1801 aggctttagt accacctgta tttcaaaatg ggggacccaa actcccggaa gaaacaagct
     1861 ctgaacagac tacgtgctca gcttagaaag aaaaaagaat ctctagctga ccagtttgac
     1921 ttcaagatgt atattgcctt tgtgttcaag gagaagaaga aaaagtcagc actttttgaa
     1981 gtgtctgagg ttataccagt catgacaaat aattatgaag aaaatattct gaaaggtgtg
     2041 cgagattcca gctattcctt ggaaagttct atagagcttc tacagaagga tgtggtacag
     2101 ctccatgccc ctcgatacca gtctatgaga agggatgtaa ttggctgtac tcaggagatg
     2161 gatttcattc tttggcctcg gaatgatatt gagaaaattg tttgtctcct gttttctagg
     2221 tggaaggaat ctgatgaacc ttttaggcct gttcaggcca aatttgaatt tcatcacggt
     2281 gactatgaga aacagtttct gcatgtactg agccgcaagg acaagacagg aattgttgtc
     2341 aacaatccta accagtcagt gtttctcttc attgacagac agcatttgca gactccaaaa
     2401 aacaaagcca ccatcttcaa gttatgcagc atctgcctct acctgccgca ggaacagctc
     2461 acccactggg cagttggcac catagaggat cacctccgtc cttacatgcc agagtaaata
     2521 agagcattga ccagcaatgg agaagaccag agaatgcagc agctattttc ttttcttgtt
     2581 ttcttaccac ttttctttca gagtttaaag aaaatggact catgcacaga acactatgcg
     2641 ttttgaaact tgttcatcct ggatttattt taatcatttg tatcacagaa ctttaaaaaa
     2701 aatcagatgt cttctgcacg gactgtgtga aagtgctttg cagactgctg cactgcatca
     2761 gcgtcttact aaagtgtgaa ggaaggacta ctgtacactg aatgcttact gtatctgaaa
     2821 gcacagggat gctcagtgtt gtggtcttca tgtttgtgct gggttttgcc tctgacatct
     2881 gtcatcagta ttgagggtga gagtgaatgt aacaggtata aataacattt aaaaacttca
     2941 tagctttgct ataatcaccg ttgttccaga gcactgtcag attcattcta atgaccagat
     3001 ggttgttaca aaaagaaatt acaaccacgg gaaagaaatg ttaatgaaaa aaagcatctc
     3061 attgagtgag gtatctctgc ctcgtgtgca ctgggccatg tttgctttct tggtactcat
     3121 tagtacatgt attttcccag atctctttcc ccgagttgct gatatagagt actctgctgt
     3181 gtgcagatgc atttatacac attaaagcag atctggagtc tggtgtggct gaagcagcta
     3241 caaaaccgag gaacagtcat agctgcaaaa accatcataa gtagaggact tttttggttt
     3301 ttgttttgtt ttttggtgtt agaaatttta attacaaata aaaaatccag tgaattttgc
     3361 agaaatcctg gtttctacac catcctaaag aagttgagtg tttgggatag aaaacaaaag
     3421 tggggctctt acattgtaaa aatacctaca gagtgtggag agttctggaa gcagaactcg
     3481 tttgtgcaat gaatatgagg aaagactact gtatagcttt tactttgttt tgtttttctt
     3541 ttaaatgaag aaaagctttg cttaagggtt gcatactttt actggagtaa atcggaatga
     3601 tcctactctt gaagtaaaac tagtgcttac tggtttccat ttgtatttag cttctggttg
     3661 gaatttgaaa aaaaaaaaaa aaagagagag acctaaataa aataggagaa agcta
//
