LOCUS       NM_001013879            2327 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 19 open reading frame
            44 (C16h19orf44), mRNA.
ACCESSION   NM_001013879 XM_214317
VERSION     NM_001013879.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079430.1.
            
            On Apr 20, 2005 this sequence version replaced XM_214317.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079430.1, SRR8487231.143936.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..2327
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /note="similar to human chromosome 19 open reading frame
                     44"
                     /db_xref="GeneID:290615"
                     /db_xref="RGD:1311847"
     exon            1..58
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     exon            59..791
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..1934
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /codon_start=1
                     /product="uncharacterized protein C19orf44 homolog"
                     /protein_id="NP_001013901.1"
                     /db_xref="GeneID:290615"
                     /db_xref="RGD:1311847"
                     /translation="MASTRRPFGPPHGAFDFRDMFFDSSKMEEIRNVQARSLGQMAPG
                     QSRILKRNQTMDEKYLLPKEEALAGTGVRLSLRPPTISSKSRASEALRKLAQIETKIL
                     KRRQVPTAWSGMESDSTASERSLPQRTDTTSVSSQYPLRTFQKQVCKTSVVGDDGQSG
                     KGSRFLKKKELPAEARSPVLAAETEKQVLLPTQREPARKYDAPDSDEEEMKVLLGSLM
                     ESSGEKERNGNQELPGTRSDLGKVFLDLTPDQPGVLCLLSADQSSLKSTSVSLRAQSL
                     QTRSGGDPASLTTSPSILRDDFSRSASSKRECIKLASSPSRMETESSEEPVSEAAADS
                     LHDFRINILSIDDLVLADGYKSDGEQKGVTTVVEDEEDLTTEHEISEHPGASSTAAVW
                     SHSMSSARSMETPTALSVSPVYSEDFEQFSGPLALEESLDRTLDTLSKFSSGEQTDTV
                     SRQPLSRTEWGRGVTRVVKETAVQTLDPAFAYQWTKAGGMAAIGPTLGGGYVDPVPIA
                     SHIISADAIEALTAYSPAVLALNDMLKQQLSLTQQFIEASHHLHHSLLRSLDEDSFHY
                     HTLEEAKEYIRCHRPAPLTMEAALQEVRKELEVHLDINDSHVEASKAAALPAEPIDGL
                     "
     exon            792..1068
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     exon            1069..1142
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     exon            1143..1518
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1614
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     exon            1615..1781
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
     exon            1782..2305
                     /gene="C16h19orf44"
                     /gene_synonym="RGD1311847"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggggccta tacattgagg ccgaaacctg gcgggcagag gacaacgccg ctactcagaa
       61 tggcttccac aagaaggccc tttggccctc cacatggtgc ttttgacttc agggatatgt
      121 tctttgatag ctcgaagatg gaagagatca gaaacgtaca agcccgaagt cttggccaaa
      181 tggcacccgg gcagagcaga atcctaaaga gaaaccaaac gatggacgag aaatatttgt
      241 tgcccaaaga ggaggccttg gcagggacgg gggtgaggct gagcttgagg ccccccacca
      301 tctcttccaa gagcagggcc agtgaggccc tgaggaaact ggcccagatt gagaccaaga
      361 tcctgaagcg gaggcaggta cccacagctt ggtccggcat ggaatctgac tccacagcca
      421 gtgagcggag tcttcctcag aggacagata caacctctgt ttcttcccag tatccactca
      481 gaactttcca gaaacaagtg tgcaaaacat ctgtggtagg agatgatggg cagagcggaa
      541 aaggtagcag gtttctgaag aagaaggagc tgcctgctga agccaggtcc ccagtgctgg
      601 cagcagagac agagaagcaa gtcctgctgc ccactcagag agaacctgcc agaaagtatg
      661 atgcccctga cagtgacgaa gaggaaatga aagtgttgct tggaagcttg atggaatctt
      721 ctggagaaaa agaaagaaat ggaaaccagg agctccctgg caccaggagc gaccttggaa
      781 aggtgttctt ggatctgact ccagatcagc cgggagtcct gtgtctgctc agtgcggacc
      841 agtccagctt aaagtcgact agtgttagct tgagagctca gtccctgcag acccgcagcg
      901 gaggggaccc agcgtccctt acgacctcac cttccatcct ccgtgatgac ttctccagat
      961 cggcatcttc aaagagggaa tgcatcaagc tggcttcctc ccccagcagg atggagacag
     1021 agtcttccga ggagccagtc tcagaagctg ctgctgacag cctccatgat tttaggatca
     1081 atattttgtc cattgatgat ctggttctgg ctgacggata caaatcagat ggggaacaga
     1141 aaggtgtgac cactgtggtt gaggatgaag aggatcttac cactgagcat gagatctcag
     1201 agcacccggg tgccagttct acagcagctg tctggtctca cagtatgtcc agtgcacgct
     1261 ccatggagac acccactgca ctctctgtaa gcccagttta ctcggaagat tttgagcagt
     1321 tctctggtcc cttggcctta gaggaatcac ttgacaggac tctggacact ttgtcaaagt
     1381 tttcatctgg tgaacagaca gatactgttt ccagacaacc tctgtcaagg acagaatggg
     1441 gcagaggtgt gaccagagtc gtgaaggaga cagctgtgca gacgcttgac cctgcctttg
     1501 cctaccagtg gaccaaggct ggtggcatgg cagccattgg acctactctt ggaggtggtt
     1561 atgtggaccc agtacccatc gccagtcaca ttatcagcgc agacgctata gaagccctga
     1621 cagcctacag ccctgcagtg ctggcgttga acgacatgct gaagcagcag ctgagcctga
     1681 cgcagcagtt catcgaggcc agccaccacc tgcaccactc cctcctgcgg tccctggatg
     1741 aggactcatt tcactaccac accttggagg aagcaaaaga gtacattagg tgccacaggc
     1801 ctgcacccct gaccatggag gctgccctgc aggaggtgag gaaggagctt gaagtccacc
     1861 tcgacatcaa tgacagccat gtggaggcaa gcaaggctgc agctctcccc gctgagccca
     1921 tagacggact ctaagctccc atctgcccag ctggctgctg aggacacagc cgtggaccca
     1981 ccacagggca gtggtgcagg atggggccag ccatgagcca gtgtgacaga cagacagcat
     2041 gtgccaggca tatcagtcat ccaggacggg accagctgcc ccatgagaac acgccatgca
     2101 ggggctgagc accctggggc acctcaccca cagctggagg aaatctttta caaaaggctt
     2161 tattggaagg caaaacagta aaatccacaa tcaattgtta acagcacagg tgtatctgct
     2221 tgtttatcct gagtcagaca catctgaaca tcatagctat gagaaatcta aaacaaaaat
     2281 caagtgtctt aaatggtact gaaaaaaaaa aaaaaaaaaa aaaaaaa
//
