LOCUS       NM_001106999            2382 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 5 open reading frame
            15 (C10h5orf15), mRNA.
ACCESSION   NM_001106999 XM_001073512 XM_006246261 XM_220404
VERSION     NM_001106999.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Mar 25, 2021 this sequence version replaced
            XM_006246261.4, NM_001106999.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079420.1, SRR22582419.1429036.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-143               JAXUCZ010000010.1  37064889-37065031
            144-649             JAXUCZ010000010.1  37072029-37072534
            650-2382            JAXUCZ010000010.1  37075761-37077493
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..2382
                     /gene="C10h5orf15"
                     /gene_synonym="RGD1310352"
                     /note="similar to human chromosome 5 open reading frame
                     15"
                     /db_xref="GeneID:303122"
                     /db_xref="RGD:1310352"
     exon            1..143
                     /gene="C10h5orf15"
                     /gene_synonym="RGD1310352"
                     /inference="alignment:Splign:2.1.0"
     CDS             8..781
                     /gene="C10h5orf15"
                     /gene_synonym="RGD1310352"
                     /note="keratinocytes associated transmembrane protein 2;
                     keratinocyte-associated transmembrane protein 2"
                     /codon_start=1
                     /product="keratinocyte-associated transmembrane protein 2
                     precursor"
                     /protein_id="NP_001100469.1"
                     /db_xref="GeneID:303122"
                     /db_xref="RGD:1310352"
                     /translation="MAAASLGRMSGAAREKLSPGSGARSFGALARSLVLALLLAPVLC
                     YGIPENTPNNATTTPPAVPENYTKPSVSQISTTLTPASTEKSGSSSSAPSPSAARSVP
                     QEEADINEDPSMEEEDLLALNSSPATVKDTLDNGDYGEPDYDWTTNPRDEEPDDNVNI
                     EISRESRRFRGFEDSVQVVKLSPPNREDSHFFFHLLIFAFCAAVVYVTYHNKRKIFLL
                     VQSRKWRDGLCSKTVEYHRLDQNVNEAMPSLKITNDYIF"
     exon            144..649
                     /gene="C10h5orf15"
                     /gene_synonym="RGD1310352"
                     /inference="alignment:Splign:2.1.0"
     exon            650..2382
                     /gene="C10h5orf15"
                     /gene_synonym="RGD1310352"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtccgttatg gctgccgcct ccttgggcag aatgagcggg gctgcacgag agaagctgtc
       61 gcccgggtcg ggagcccgga gcttcggagc gctggcgcga tctctggtgc tggcgttgct
      121 gctcgcgccg gtcctgtgct atggtatacc agagaatact ccaaacaatg ctaccactac
      181 tcctccggct gtgcctgaaa actacaccaa accttctgtt tcccagatca gcaccacact
      241 taccccagcc agtacagaga aaagtggaag cagctcttcg gcgcccagcc cctctgctgc
      301 ccggtctgtg ccccaggagg aggccgacat caatgaagat cccagcatgg aggaggagga
      361 tctcctggca ctcaacagtt ccccagccac agtcaaagac actctggaca atggtgacta
      421 cggagagcca gactatgact ggaccaccaa ccccagggat gaggagcctg atgataatgt
      481 caacattgag ataagcagag agagcaggcg cttcagaggc ttcgaggact cagtgcaggt
      541 ggtgaagctc tcacccccca acagagagga tagccatttc ttttttcatc tccttatttt
      601 tgctttctgt gcagctgttg tttatgtcac ctatcacaac aaaaggaaga ttttcctcct
      661 agttcaaagc agaaagtggc gtgatggctt gtgttccaaa actgtggagt accatcgttt
      721 ggaccagaac gtgaatgagg ccatgccttc tctgaagatc accaatgact acattttcta
      781 aagcacttga ttggcgttgg ctcattatgc tgttttattt gcttcacttt tctatgatgt
      841 gcagatgttt gccacaggca agtgggacct aaccgagacg gggcactctc tcttgccttg
      901 gtgctttgag aactaactgt cgcaaacaag gagtatatga tttttttttt tttttaatct
      961 ttctttagag ctagattcaa tcaggtatct gaaatgtgag ttaaacatta ctctatattt
     1021 ttgtgtagtt gttattattt tccatttatt gtgcctctgg cagctgtgtt ctctttgaaa
     1081 ggccccaaac tggagctcaa gtctcacagg gtccagcact gctggttccc ctccctctct
     1141 gacacccaga tgctgtttcc cggttccttt attctactta tggttgagat cgggttccac
     1201 aaagtagcct aggctggcct caaactatca gtcttactgc cttggcttct caagtgctgg
     1261 tactaccaag cgtggacact cacccatttc caaatctcat agtttcaaac acatcttggg
     1321 gtgtgtggtc ccagttttaa tgtacaaaga ttgcaatcta atgctttgct ttaaaataac
     1381 atttccccat ctttcaaagc tgctttaagg acagtgaagc ctgctcagtt actgatggca
     1441 cttgctgcct accctgacaa cctgagttca gtccccaggt agaaggagat agtgaagtct
     1501 tggaggttgt cctctgacct ccacatgtgt accatggcat ttgtgcacct acacacacat
     1561 gcttagacac atagtaaata aattagttaa aaagacccac tgtgggtgtt ctaggcactt
     1621 gaaacagtgt aagataagat agtgtagttg ctgcctcact ggtcatggtg aacttgttta
     1681 ggagttcaca gtgagcacaa ggggaatgtt aggtggattc cagtgtttgg tttggattat
     1741 ggaatgaagt gtagggtaga agctggtaga ccgtttaacc catgaccagg ggctattcat
     1801 cagcacttga ttttagcatg ggttccaggg ttcagatgac gagcggagtg taaaacaggt
     1861 cagaggtctc ttactttgtt tcttgatcac agtacattgg aggagactct ccagcccatt
     1921 gttacttgag tgatactgtg tcttggtcct gcagttaaag cagtagtggg aagaagttca
     1981 cacaggccta tgtagcaatg accttcaaac ctgcctcctc cccagccccc agcagctggg
     2041 gttatttgct gtgttttatg gtagcctgtt tttttagagt tgatcagaat gaaaatgtgt
     2101 gatttgaacc atgcttgact atcaagcttc attacaactt tccagaaaac atggtcttta
     2161 ctgcgtgctc agtaaagctg gggcagccag cagccatgct ccctgcgtgg acacggaagc
     2221 atcagcgtgg tcttccccct tcagggcgtt ggctgtccct gggaagggca ctgtggtgaa
     2281 acacatctgg actgttttat tgcagtagtt tttttcatat ctgaaattgt attatttaat
     2341 attttgaata agattttaag aaataaatgg taaagatata aa
//
