LOCUS       NM_001100551            1308 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            35 (C10h1orf35), mRNA.
ACCESSION   NM_001100551 XM_001076933 XM_220532
VERSION     NM_001100551.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1308)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Apr 8, 2021 this sequence version replaced NM_001100551.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC162001.1, SRR26643289.27812.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-343               JAXUCZ010000010.1  44494385-44494727
            344-389             JAXUCZ010000010.1  44494874-44494919
            390-472             JAXUCZ010000010.1  44495002-44495084
            473-545             JAXUCZ010000010.1  44495161-44495233
            546-631             JAXUCZ010000010.1  44495338-44495423
            632-763             JAXUCZ010000010.1  44496053-44496184
            764-1308            JAXUCZ010000010.1  44496303-44496847
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..1308
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /note="similar to human chromosome 1 open reading frame
                     35"
                     /db_xref="GeneID:303180"
                     /db_xref="RGD:1304587"
     exon            1..343
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..881
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /codon_start=1
                     /product="multiple myeloma tumor-associated protein 2
                     homolog"
                     /protein_id="NP_001094021.1"
                     /db_xref="GeneID:303180"
                     /db_xref="RGD:1304587"
                     /translation="MFGSSRGGVRGGQDQFNWEDVKTDKQRENYLGNSLMAPVGRWQK
                     GRDLTWYAKDRAPCTGPSREEELAAVREAEREALLAALGYKNVRKQPTGLSKEDFVEI
                     CKREGGDPEEKGVDRLLGLGSASGSAGRVALSREDKEAAKLGLSVFTHHRVDSEGPST
                     APSATRKKPRAEDKAELDAESHKKSKKEKKKKKKKHKKHKKKKDKEHKREADSCSSSP
                     SPARPRRQRHSDFSPCYKRKREHSQDSGRNPSHRRQDRSSDD"
     exon            344..389
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
     exon            390..472
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
     exon            473..545
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
     exon            546..631
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
     exon            632..763
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
     exon            764..1308
                     /gene="C10h1orf35"
                     /gene_synonym="Mmtag2; RGD1304587"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggagagtga cgtcacggcg agcgtccgga ggccgagtgc tgcggggagt ccgactccag
       61 accgtagata ctgaagaagg tgcagcggct ccagcaccat gttcggctcc agtcgcggcg
      121 gcgtgcgtgg cgggcaagac cagttcaatt gggaagatgt gaagactgac aagcagaggg
      181 agaactacct gggcaactcg ctgatggcac cagtaggccg ctggcagaag ggccgcgacc
      241 tcacctggta cgcgaaggac cgcgcgccgt gtaccggccc gagccgtgaa gaagaattgg
      301 cagccgtgcg tgaggcggag cgtgaggcgc tgctggccgc acttggttac aagaacgtga
      361 ggaaacagcc caccggcctg agcaaggagg acttcgtgga gatctgcaaa cgggaaggag
      421 gagatcctga ggagaagggt gtggaccggc tgctgggtct gggcagcgcc agtggctccg
      481 cgggccgtgt ggcactatcc cgagaagaca aagaggctgc caaacttggg ctgtcagtgt
      541 tcacgcacca ccgtgtggac agcgaaggcc caagtactgc cccatctgct accaggaaga
      601 agccccgtgc tgaagacaag gctgaactgg atgcagagag ccataagaaa agcaagaaag
      661 aaaagaagaa aaagaagaag aaacataaga aacacaaaaa gaagaaagac aaagaacaca
      721 agagggaggc tgacagctgc tcatcttctc cctctcctgc ccggcccaga cgccagagac
      781 attctgactt ctctccctgc tataagagga agcgggaaca tagccaggac agtggaagga
      841 acccatccca cagacgacaa gacagaagtt ctgatgactg agaatgtggc tacaccaaag
      901 gacaccagag gcctggctgc tctgcccaac tctgagctct gtggggtcta tcactgatgc
      961 caagtggcta ccagcccact cctacttgct aactatctca tccctatctg ggataaggca
     1021 gggctgctcc ctaatagcat cctgagccat gcttgctgga tcttaggatc tatcctgcca
     1081 attggaggca accactccgg gtcagagtgg gccctgggtt accagagagc ctagtggttc
     1141 tatgagggta atgctctccc cttgtctccc cacccaccca caattgccca ggagactgtc
     1201 tgccgccata gtccaggccc ttgaggtttt ggggtgtgtg ttactgatta cttctacttt
     1261 tttttgtatc agcccacttt gtacttaagt aaatgtattt taaaagta
//
