LOCUS       NM_198789               1807 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus basic leucine zipper and W2 domains 1 (Bzw1),
            mRNA.
ACCESSION   NM_198789 XM_343572
VERSION     NM_198789.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 1807)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 1807)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   5  (bases 1 to 1807)
  AUTHORS   Mitra,P., Vaughan,P.S., Stein,J.L., Stein,G.S. and van Wijnen,A.J.
  TITLE     Purification and functional analysis of a novel
            leucine-zipper/nucleotide-fold protein, BZAP45, stimulating cell
            cycle regulated histone H4 gene transcription
  JOURNAL   Biochemistry 40 (35), 10693-10699 (2001)
   PUBMED   11524015
REFERENCE   6  (bases 1 to 1807)
  AUTHORS   Hoja,M.R., Wahlestedt,C. and Hoog,C.
  TITLE     A visual intracellular classification strategy for uncharacterized
            human proteins
  JOURNAL   Exp Cell Res 259 (1), 239-246 (2000)
   PUBMED   10942595
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061580.1.
            
            On Aug 31, 2012 this sequence version replaced NM_198789.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061580.1, SRR8487226.31180.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1807              BC061580.1         5-1811
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q31"
     gene            1..1807
                     /gene="Bzw1"
                     /note="basic leucine zipper and W2 domains 1"
                     /db_xref="GeneID:363232"
                     /db_xref="RGD:735129"
     exon            1..87
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            88..161
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..1357
                     /gene="Bzw1"
                     /note="basic leucine zipper and W2 domain-containing
                     protein 1"
                     /codon_start=1
                     /product="eIF5-mimic protein 2"
                     /protein_id="NP_942084.1"
                     /db_xref="GeneID:363232"
                     /db_xref="RGD:735129"
                     /translation="MNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETG
                     TDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQE
                     DLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLAN
                     GTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMEL
                     FPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRGDPFKDIIL
                     YVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLLAAFTTQ
                     GQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGKSV
                     FLEQMKKFVEWLKNAEEESESEAEEGD"
     exon            162..338
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            339..433
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            434..499
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            500..635
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            636..916
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            917..1063
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            1064..1202
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            1203..1325
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
     exon            1326..1777
                     /gene="Bzw1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgttagtt ccggtcgcag aggagacagc gccgcagttg ccgccagctc gggaatttct
       61 ggctcttttc tcttcgcctt aaattcgggt gtcttttatg aataatcaaa agcagcaaaa
      121 accaacgcta tcaggccagc gttttaaaac cagaaaaaga gatgaaaaag agaggtttga
      181 ccctactcag tttcaagact gtattattca aggcttaact gaaactggta ctgatttgga
      241 agcagtagct aagtttcttg atgcttctgg agcaaaactt gactaccgcc gctatgcaga
      301 aacactcttt gacattctgg tggctggcgg aatgctggcc ccaggtggta cactggcaga
      361 tgacatgatg cgcacagatg tctgtgtgtt tgcagcacaa gaagacctag agaccatgca
      421 agcattcgct caggttttta acaagttaat caggcgctac aaatacctgg agaaaggttt
      481 tgaagatgaa gttaaaaagt tactgctctt cctgaaggga ttttcagagt cggagaggaa
      541 caagctcgcc atgttgactg gggtccttct ggctaatgga accctcaatg catccattct
      601 taacagcctt tataatgaga atttggttaa agaaggggtt tcagcagctt ttgctgtaaa
      661 gctctttaaa tcatggataa atgagaaaga catcaatgca gttgctgcaa gtcttcggaa
      721 agtcagcatg gacaacagac tgatggagct gttccctgcc aataaacaga gtgttgagca
      781 cttcactaag tatttcactg aggcaggctt gaaagagctt tcagagtatg tccgcaacca
      841 gcagaccatt ggggctcgga aggagctcca gaaggagctt caggagcaga tgtcccgcgg
      901 tgaccccttc aaagacataa ttttatatgt caaggaggag atgaagaaaa acaacatccc
      961 agaaccagtg gtcattggga ttgtgtggtc aagtgtgatg agcaccgtgg agtggaacaa
     1021 gaaggaggag cttgtagcag aacaagccat caagcacttg aagcaataca gccctctact
     1081 tgctgccttc actactcaag gtcagtctga gctgactctg ttactgaaga ttcaggagta
     1141 ttgctatgac aacattcact tcatgaaagc cttccagaaa atagtggtgc tcttttataa
     1201 agctgaggtc ctgagtgaag agcccattct gaagtggtat aaagacgcac atgttgcaaa
     1261 ggggaaaagt gtcttccttg agcaaatgaa gaagtttgta gaatggctca aaaatgctga
     1321 ggaggaatct gagtcggaag ctgaagaagg tgactgaatt ttgaaacaac atcctcagta
     1381 aagcaaacag gagttgtaga taaatgtcat gtctcatgtg tcctggttct tacatcttcc
     1441 tacctcccta tatcaagcat gatataaggg ctttcatgca gtttttattt taactgtttt
     1501 ctggttactg ggaaggttgg gtttggttcc tgaaccgtgt gtaaggagct gcaggagccg
     1561 tggaacggaa gctggcgctg cactggtctt cagttccctc tacctcctgt attttctact
     1621 gtaataatgt gatgtaaggc cctccgcagt gcagtgagca cttcacctta ttccctgggt
     1681 ttctatataa acagttttca agatatgatt tggttaaaaa taatttgtta caaaaagatt
     1741 ctgtttgcaa attaaactgt aaaagtatcc aaagtctaaa aaaaaaaaaa aaaaaaaaaa
     1801 aaaaaaa
//
