LOCUS       NM_001008309             880 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus basic transcription factor 3 (Btf3), mRNA.
ACCESSION   NM_001008309 XM_215460
VERSION     NM_001008309.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 880)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 880)
  AUTHORS   Deng,J.M. and Behringer,R.R.
  TITLE     An insertional mutation in the BTF3 transcription factor gene leads
            to an early postimplantation lethality in mice
  JOURNAL   Transgenic Res 4 (4), 264-269 (1995)
   PUBMED   7655515
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085343.1.
            
            On Dec 16, 2004 this sequence version replaced XM_215460.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085343.1, FQ229173.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..880
                     /gene="Btf3"
                     /note="basic transcription factor 3"
                     /db_xref="GeneID:294680"
                     /db_xref="RGD:1308095"
     exon            1..109
                     /gene="Btf3"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..598
                     /gene="Btf3"
                     /codon_start=1
                     /product="transcription factor BTF3"
                     /protein_id="NP_001008310.1"
                     /db_xref="GeneID:294680"
                     /db_xref="RGD:1308095"
                     /translation="MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKL
                     QFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEM
                     LPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNE
                     AN"
     exon            110..178
                     /gene="Btf3"
                     /inference="alignment:Splign:2.1.0"
     exon            179..292
                     /gene="Btf3"
                     /inference="alignment:Splign:2.1.0"
     exon            293..494
                     /gene="Btf3"
                     /inference="alignment:Splign:2.1.0"
     exon            495..551
                     /gene="Btf3"
                     /inference="alignment:Splign:2.1.0"
     exon            552..861
                     /gene="Btf3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgccatctt gcgtccccgc gtgtgtgcgc cttatctcag ctggtctgcc cgagaccccc
       61 tgagcgtgaa ccttagtccc ccgcgcggcc ccatttccac tccgacaaga tgaaagaaac
      121 gatcatgaac caggaaaaac tcgccaaact gcaggcacaa gtgcgcattg gtgggaaagg
      181 aactgctcgt agaaagaaga aggtggttca cagaacagcc acagcagacg ataaaaaact
      241 gcagttctcc ttaaagaagt taggggtaaa caatatctct ggtattgaag aggtgaacat
      301 gtttacaaac caaggaacag tgatccattt taacaaccct aaagttcagg cgtctttggc
      361 agcaaacacc ttcaccatta caggccacgc cgagacaaag cagctgacag aaatgcttcc
      421 cagcatcctc aaccagcttg gtgcagacag tctgaccagt ttgaggagac tggctgaagc
      481 tctgcccaaa caatctgtgg atggaaaagc accacttgct actggagagg atgatgatga
      541 tgaagttcca gatctggtgg agaattttga tgaagcttct aagaacgagg caaactgaat
      601 cgaagcaact tctgaagaag gtgacacttg gcagaagtta caataggagc tgctgtttta
      661 tatcatgact gctttttaaa aattttttgt ttattatgga tctgataaaa tctagatctc
      721 taatattttt aagcccaagc cccccggaca ctgcagctct tttcagtttc gcttaagcct
      781 aattcattct ttgcagcaaa ttaagctgaa gacgcctggg aataaagttt ggaaaaggtt
      841 aataaaattc tttgcctagt aaaaaaaaaa aaaaaaaaaa
//
