LOCUS       XM_039094457            2207 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus biotinidase (Btd), transcript variant
            X13, mRNA.
ACCESSION   XM_039094457
VERSION     XM_039094457.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094457.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2207
                     /gene="Btd"
                     /note="biotinidase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 16 ESTs, 2 long
                     SRA reads, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 22 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
     CDS             329..1894
                     /gene="Btd"
                     /codon_start=1
                     /product="biotinidase isoform X2"
                     /protein_id="XP_038950385.1"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
                     /translation="MSGARTAHALVFLLGCSALALGVCSASLEHGEAEYYVAAVYEHR
                     SVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTS
                     IYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGS
                     DPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKF
                     GMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLA
                     ANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENTTSEMDP
                     SHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMYDNFTLVPVWGKEGH
                     LQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCG
                     QEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGL
                     VTAALYGRLYERN"
ORIGIN      
        1 aaggggcggg acgagaagtc cgtccttggt gaggcgatca tgcgagcacg cccattctcc
       61 agtcagtctt ttccggactc ggccatcagc gggaggcggg acgagccgga gaccgcgtcc
      121 tctaccgagc aggatcagtc ttcaactggc caattttgcc atttggcaaa gagaaaaatc
      181 actgggcaag ttactgcctt gcagttcaag acccatgctt aactagattt ctcatgcagc
      241 ccaggccctc cagcactggt taatagtcat cttcattcgt ccctcgaaga cgtgcccaca
      301 gaccagccca acatttacgg tctgcattat gtctggagcc cgcactgcgc atgcgctcgt
      361 cttcctcctc ggctgttctg cgcttgcgtt gggcgtctgc tcagcctccc tggagcacgg
      421 cgaggctgag tactacgtgg ctgccgtgta cgaacaccga tcggtcctga gcccaaaccc
      481 cctggagctc agcagccgcc agcaggccct ggagctcatg aagcagaacc tcgacgtcta
      541 tgaacagcaa gtgatggctg cagcccagaa gggtgcgcac attatagtgt tcccagaaga
      601 cggtatccac ggattcaact tcacaagaac atccatttac ccattcttgg acttgatgcc
      661 atctcccagg ctggtcagtt ggaacccgtg tctggagccc tttcgcttca atgacacgga
      721 ggtcctccag cgcctgagtt gcatggccat caagggaaag atgttcttgg tggccaatct
      781 tgggacaaaa cagccttgcc tcggcagcga ccctgggtgc ccgcaggacg ggagatacca
      841 gtttaacaca aacgtcgcgt tcagtgacaa cggaaccctc gtcggccgct accgtaagca
      901 caacctgtac tttgaggaag ccttcgatag ccctgctgac gtggacctca ccacctttga
      961 tacgccgttc gcgggcaagt tcggtatgtt cacttgcttt gatatcctgt tctttgaccc
     1021 cgcggtccgg ctcctcagag actttgaggt aaagcacatt gcgtacccta cggcctggat
     1081 gaaccagctg ccgctcttgg cagccattga aatccagaaa gcattcgcca ccgccttcgg
     1141 cgtcaccgtt ctggcagcta acatccacca cccgactctg gggatgacgg gcagtggcat
     1201 acacacccct ctgaagtcct tttggtacca taacatggac gaccccgaag gtcaccttat
     1261 aattgcccgg gtagccacaa acccacaggg cctcgttggg acagagaata caactagtga
     1321 aatggatccg tcccatagga agttcttaaa agtcttgtct ggggatccgt actgtgagaa
     1381 ggatgcccag gaagtgcgct gcgacgaggc tgccaagtgg aacctgaacg caccacctac
     1441 cttccactcg gagatgatgt atgacaattt caccctggtc cccgtctggg gaaaggaagg
     1501 ccacctccag gtgtgctcca acagtctctg ttgccactta cttttcgaga ggcccgccct
     1561 gtccaaagag ctatatgccc tgggtgtctt tgacggactc cacacagtgc acggtaccta
     1621 ctacgttcaa gcctgtgccc tggtcaagtg cgggggcgct ggctttgaaa cctgcgggca
     1681 ggagatctcg gaggccgagg gcttgtttga ctttcatctg tgggggaact tcagcacctt
     1741 gtatgtcttc cctttatttc tcacctcggg gatgacccta gacacccctg accagctcgg
     1801 gtgggagagc gaccactatt tcttgaggaa gaggggactg tcctccggcc tggtgacggc
     1861 agctctctat gggcggttgt atgagaggaa ttaggaaaac tgtggtcagc aggttgggct
     1921 ctgcaggctg gccttgcctt cccacggccc acagatccca aacactggga aaaccgcccc
     1981 gcccctgtgg cactggatcc caccctgggg aactgtaaga agatgggaga ggcagttcct
     2041 ccttcctttc tacataatga ctgagatatt ttctggtatt ttctattcac attattcttt
     2101 ttcaagccac accctcttac cactactaca caattggttt taaagactaa gccaaaaaaa
     2161 aaaaaaaaaa ataaacatca gctgccattc tacaaaccca cgggata
//
