LOCUS       XM_006252622            2099 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus biotinidase (Btd), transcript variant
            X16, mRNA.
ACCESSION   XM_006252622
VERSION     XM_006252622.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252622.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006252622.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2099
                     /gene="Btd"
                     /note="biotinidase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 16 ESTs, 2 long SRA
                     reads, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 74 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
     CDS             221..1786
                     /gene="Btd"
                     /codon_start=1
                     /product="biotinidase isoform X2"
                     /protein_id="XP_006252684.1"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
                     /translation="MSGARTAHALVFLLGCSALALGVCSASLEHGEAEYYVAAVYEHR
                     SVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTS
                     IYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGS
                     DPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKF
                     GMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLA
                     ANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENTTSEMDP
                     SHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMYDNFTLVPVWGKEGH
                     LQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCG
                     QEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGL
                     VTAALYGRLYERN"
ORIGIN      
        1 cgggacgaga agtccgtcct tggtgaggcg atcatgcgag cacgcccatt ctccagtcag
       61 tcttttccgg actcggccat cagcgggagg cgggacgagc cggagaccgc gtcctctacc
      121 gagcaggatc agtcttcaac tggccaattt tgccatttgg caaagagaaa aatcactggg
      181 caagttactg ccttgcagtt caagatttac ggtctgcatt atgtctggag cccgcactgc
      241 gcatgcgctc gtcttcctcc tcggctgttc tgcgcttgcg ttgggcgtct gctcagcctc
      301 cctggagcac ggcgaggctg agtactacgt ggctgccgtg tacgaacacc gatcggtcct
      361 gagcccaaac cccctggagc tcagcagccg ccagcaggcc ctggagctca tgaagcagaa
      421 cctcgacgtc tatgaacagc aagtgatggc tgcagcccag aagggtgcgc acattatagt
      481 gttcccagaa gacggtatcc acggattcaa cttcacaaga acatccattt acccattctt
      541 ggacttgatg ccatctccca ggctggtcag ttggaacccg tgtctggagc cctttcgctt
      601 caatgacacg gaggtcctcc agcgcctgag ttgcatggcc atcaagggaa agatgttctt
      661 ggtggccaat cttgggacaa aacagccttg cctcggcagc gaccctgggt gcccgcagga
      721 cgggagatac cagtttaaca caaacgtcgc gttcagtgac aacggaaccc tcgtcggccg
      781 ctaccgtaag cacaacctgt actttgagga agccttcgat agccctgctg acgtggacct
      841 caccaccttt gatacgccgt tcgcgggcaa gttcggtatg ttcacttgct ttgatatcct
      901 gttctttgac cccgcggtcc ggctcctcag agactttgag gtaaagcaca ttgcgtaccc
      961 tacggcctgg atgaaccagc tgccgctctt ggcagccatt gaaatccaga aagcattcgc
     1021 caccgccttc ggcgtcaccg ttctggcagc taacatccac cacccgactc tggggatgac
     1081 gggcagtggc atacacaccc ctctgaagtc cttttggtac cataacatgg acgaccccga
     1141 aggtcacctt ataattgccc gggtagccac aaacccacag ggcctcgttg ggacagagaa
     1201 tacaactagt gaaatggatc cgtcccatag gaagttctta aaagtcttgt ctggggatcc
     1261 gtactgtgag aaggatgccc aggaagtgcg ctgcgacgag gctgccaagt ggaacctgaa
     1321 cgcaccacct accttccact cggagatgat gtatgacaat ttcaccctgg tccccgtctg
     1381 gggaaaggaa ggccacctcc aggtgtgctc caacagtctc tgttgccact tacttttcga
     1441 gaggcccgcc ctgtccaaag agctatatgc cctgggtgtc tttgacggac tccacacagt
     1501 gcacggtacc tactacgttc aagcctgtgc cctggtcaag tgcgggggcg ctggctttga
     1561 aacctgcggg caggagatct cggaggccga gggcttgttt gactttcatc tgtgggggaa
     1621 cttcagcacc ttgtatgtct tccctttatt tctcacctcg gggatgaccc tagacacccc
     1681 tgaccagctc gggtgggaga gcgaccacta tttcttgagg aagaggggac tgtcctccgg
     1741 cctggtgacg gcagctctct atgggcggtt gtatgagagg aattaggaaa actgtggtca
     1801 gcaggttggg ctctgcaggc tggccttgcc ttcccacggc ccacagatcc caaacactgg
     1861 gaaaaccgcc ccgcccctgt ggcactggat cccaccctgg ggaactgtaa gaagatggga
     1921 gaggcagttc ctccttcctt tctacataat gactgagata ttttctggta ttttctattc
     1981 acattattct ttttcaagcc acaccctctt accactacta cacaattggt tttaaagact
     2041 aagccaaaaa aaaaaaaaaa aaataaacat cagctgccat tctacaaacc cacgggata
//
