LOCUS       XM_006252618            2010 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus biotinidase (Btd), transcript variant
            X14, mRNA.
ACCESSION   XM_006252618
VERSION     XM_006252618.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252618.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006252618.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2010
                     /gene="Btd"
                     /note="biotinidase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 19 ESTs, 4 long SRA
                     reads, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 225
                     samples with support for all annotated introns"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
     CDS             132..1697
                     /gene="Btd"
                     /codon_start=1
                     /product="biotinidase isoform X2"
                     /protein_id="XP_006252680.1"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
                     /translation="MSGARTAHALVFLLGCSALALGVCSASLEHGEAEYYVAAVYEHR
                     SVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTS
                     IYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGS
                     DPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKF
                     GMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLA
                     ANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENTTSEMDP
                     SHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMYDNFTLVPVWGKEGH
                     LQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCG
                     QEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGL
                     VTAALYGRLYERN"
ORIGIN      
        1 gtccgtcctt ggtgaggcga tcatgcgagc acgcccattc tccagtcagt cttttccgga
       61 ctcggccatc agcgggaggc gggacgagcc ggagaccgcg tcctctaccg agcagattta
      121 cggtctgcat tatgtctgga gcccgcactg cgcatgcgct cgtcttcctc ctcggctgtt
      181 ctgcgcttgc gttgggcgtc tgctcagcct ccctggagca cggcgaggct gagtactacg
      241 tggctgccgt gtacgaacac cgatcggtcc tgagcccaaa ccccctggag ctcagcagcc
      301 gccagcaggc cctggagctc atgaagcaga acctcgacgt ctatgaacag caagtgatgg
      361 ctgcagccca gaagggtgcg cacattatag tgttcccaga agacggtatc cacggattca
      421 acttcacaag aacatccatt tacccattct tggacttgat gccatctccc aggctggtca
      481 gttggaaccc gtgtctggag ccctttcgct tcaatgacac ggaggtcctc cagcgcctga
      541 gttgcatggc catcaaggga aagatgttct tggtggccaa tcttgggaca aaacagcctt
      601 gcctcggcag cgaccctggg tgcccgcagg acgggagata ccagtttaac acaaacgtcg
      661 cgttcagtga caacggaacc ctcgtcggcc gctaccgtaa gcacaacctg tactttgagg
      721 aagccttcga tagccctgct gacgtggacc tcaccacctt tgatacgccg ttcgcgggca
      781 agttcggtat gttcacttgc tttgatatcc tgttctttga ccccgcggtc cggctcctca
      841 gagactttga ggtaaagcac attgcgtacc ctacggcctg gatgaaccag ctgccgctct
      901 tggcagccat tgaaatccag aaagcattcg ccaccgcctt cggcgtcacc gttctggcag
      961 ctaacatcca ccacccgact ctggggatga cgggcagtgg catacacacc cctctgaagt
     1021 ccttttggta ccataacatg gacgaccccg aaggtcacct tataattgcc cgggtagcca
     1081 caaacccaca gggcctcgtt gggacagaga atacaactag tgaaatggat ccgtcccata
     1141 ggaagttctt aaaagtcttg tctggggatc cgtactgtga gaaggatgcc caggaagtgc
     1201 gctgcgacga ggctgccaag tggaacctga acgcaccacc taccttccac tcggagatga
     1261 tgtatgacaa tttcaccctg gtccccgtct ggggaaagga aggccacctc caggtgtgct
     1321 ccaacagtct ctgttgccac ttacttttcg agaggcccgc cctgtccaaa gagctatatg
     1381 ccctgggtgt ctttgacgga ctccacacag tgcacggtac ctactacgtt caagcctgtg
     1441 ccctggtcaa gtgcgggggc gctggctttg aaacctgcgg gcaggagatc tcggaggccg
     1501 agggcttgtt tgactttcat ctgtggggga acttcagcac cttgtatgtc ttccctttat
     1561 ttctcacctc ggggatgacc ctagacaccc ctgaccagct cgggtgggag agcgaccact
     1621 atttcttgag gaagagggga ctgtcctccg gcctggtgac ggcagctctc tatgggcggt
     1681 tgtatgagag gaattaggaa aactgtggtc agcaggttgg gctctgcagg ctggccttgc
     1741 cttcccacgg cccacagatc ccaaacactg ggaaaaccgc cccgcccctg tggcactgga
     1801 tcccaccctg gggaactgta agaagatggg agaggcagtt cctccttcct ttctacataa
     1861 tgactgagat attttctggt attttctatt cacattattc tttttcaagc cacaccctct
     1921 taccactact acacaattgg ttttaaagac taagccaaaa aaaaaaaaaa aaaataaaca
     1981 tcagctgcca ttctacaaac ccacgggata
//
