LOCUS       XM_006252615            2368 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus biotinidase (Btd), transcript variant
            X7, mRNA.
ACCESSION   XM_006252615
VERSION     XM_006252615.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252615.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006252615.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2368
                     /gene="Btd"
                     /note="biotinidase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 22 ESTs, 4 long SRA
                     reads, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 220
                     samples with support for all annotated introns"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
     CDS             490..2055
                     /gene="Btd"
                     /codon_start=1
                     /product="biotinidase isoform X2"
                     /protein_id="XP_006252677.1"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
                     /translation="MSGARTAHALVFLLGCSALALGVCSASLEHGEAEYYVAAVYEHR
                     SVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTS
                     IYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGS
                     DPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKF
                     GMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLA
                     ANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENTTSEMDP
                     SHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMYDNFTLVPVWGKEGH
                     LQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCG
                     QEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGL
                     VTAALYGRLYERN"
ORIGIN      
        1 gtccttggtg aggcgatcat gcgagcacgc ccattctcca gtcagtcttt tccggactcg
       61 gccatcagcg ggaggcggga cgagccggag accgcgtcct ctaccgagca gaaaatccca
      121 tgttaccact atgagaagga ttttctttcc aaagcggtac gtccttaagc aagtgattcg
      181 gagtagcaga caaagcagaa aacagtgaaa gccgtgtgcg ggactctgac agggagactt
      241 ctttatggct gccctgtggg tgacacagca gatgctagaa ttccaaaccg ccccaaataa
      301 aaactgaaga atatcggcta ggaagctgcc ctgcgttcgg gagcctcagg accatcgcgg
      361 ctgtcctaga gggctgacct gcaatgctat gtatgtaaga agactcgagc aaagcatcat
      421 caaatatatc gcagaattgt gtccaaattt cagcccagtt cctgcggcgc aggatttacg
      481 gtctgcatta tgtctggagc ccgcactgcg catgcgctcg tcttcctcct cggctgttct
      541 gcgcttgcgt tgggcgtctg ctcagcctcc ctggagcacg gcgaggctga gtactacgtg
      601 gctgccgtgt acgaacaccg atcggtcctg agcccaaacc ccctggagct cagcagccgc
      661 cagcaggccc tggagctcat gaagcagaac ctcgacgtct atgaacagca agtgatggct
      721 gcagcccaga agggtgcgca cattatagtg ttcccagaag acggtatcca cggattcaac
      781 ttcacaagaa catccattta cccattcttg gacttgatgc catctcccag gctggtcagt
      841 tggaacccgt gtctggagcc ctttcgcttc aatgacacgg aggtcctcca gcgcctgagt
      901 tgcatggcca tcaagggaaa gatgttcttg gtggccaatc ttgggacaaa acagccttgc
      961 ctcggcagcg accctgggtg cccgcaggac gggagatacc agtttaacac aaacgtcgcg
     1021 ttcagtgaca acggaaccct cgtcggccgc taccgtaagc acaacctgta ctttgaggaa
     1081 gccttcgata gccctgctga cgtggacctc accacctttg atacgccgtt cgcgggcaag
     1141 ttcggtatgt tcacttgctt tgatatcctg ttctttgacc ccgcggtccg gctcctcaga
     1201 gactttgagg taaagcacat tgcgtaccct acggcctgga tgaaccagct gccgctcttg
     1261 gcagccattg aaatccagaa agcattcgcc accgccttcg gcgtcaccgt tctggcagct
     1321 aacatccacc acccgactct ggggatgacg ggcagtggca tacacacccc tctgaagtcc
     1381 ttttggtacc ataacatgga cgaccccgaa ggtcacctta taattgcccg ggtagccaca
     1441 aacccacagg gcctcgttgg gacagagaat acaactagtg aaatggatcc gtcccatagg
     1501 aagttcttaa aagtcttgtc tggggatccg tactgtgaga aggatgccca ggaagtgcgc
     1561 tgcgacgagg ctgccaagtg gaacctgaac gcaccaccta ccttccactc ggagatgatg
     1621 tatgacaatt tcaccctggt ccccgtctgg ggaaaggaag gccacctcca ggtgtgctcc
     1681 aacagtctct gttgccactt acttttcgag aggcccgccc tgtccaaaga gctatatgcc
     1741 ctgggtgtct ttgacggact ccacacagtg cacggtacct actacgttca agcctgtgcc
     1801 ctggtcaagt gcgggggcgc tggctttgaa acctgcgggc aggagatctc ggaggccgag
     1861 ggcttgtttg actttcatct gtgggggaac ttcagcacct tgtatgtctt ccctttattt
     1921 ctcacctcgg ggatgaccct agacacccct gaccagctcg ggtgggagag cgaccactat
     1981 ttcttgagga agaggggact gtcctccggc ctggtgacgg cagctctcta tgggcggttg
     2041 tatgagagga attaggaaaa ctgtggtcag caggttgggc tctgcaggct ggccttgcct
     2101 tcccacggcc cacagatccc aaacactggg aaaaccgccc cgcccctgtg gcactggatc
     2161 ccaccctggg gaactgtaag aagatgggag aggcagttcc tccttccttt ctacataatg
     2221 actgagatat tttctggtat tttctattca cattattctt tttcaagcca caccctctta
     2281 ccactactac acaattggtt ttaaagacta agccaaaaaa aaaaaaaaaa aataaacatc
     2341 agctgccatt ctacaaaccc acgggata
//
