LOCUS       XM_006252614            2467 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus biotinidase (Btd), transcript variant
            X9, mRNA.
ACCESSION   XM_006252614
VERSION     XM_006252614.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252614.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006252614.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2467
                     /gene="Btd"
                     /note="biotinidase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 ESTs, 3 long SRA
                     reads, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 114
                     samples with support for all annotated introns"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
     CDS             589..2154
                     /gene="Btd"
                     /codon_start=1
                     /product="biotinidase isoform X2"
                     /protein_id="XP_006252676.1"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
                     /translation="MSGARTAHALVFLLGCSALALGVCSASLEHGEAEYYVAAVYEHR
                     SVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTS
                     IYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGS
                     DPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKF
                     GMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLA
                     ANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENTTSEMDP
                     SHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMYDNFTLVPVWGKEGH
                     LQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCG
                     QEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGL
                     VTAALYGRLYERN"
ORIGIN      
        1 aaggggcggg acgagaagtc cgtccttggt gaggcgatca tgcgagcacg cccattctcc
       61 agtcagtctt ttccggactc ggccatcagc gggaggcggg acgagccgga gaccgcgtcc
      121 tctaccgagc aggatcagtc ttcaactggc caattttgcc atttggcaaa gagaaaaatc
      181 actgggcaag ttactgcctt gcagttcaag aaaatcccat gttaccacta tgagaaggat
      241 tttctttcca aagcggtacg tccttaagca agtgattcgg agtagcagac aaagcagaaa
      301 acagtgaaag ccgtgtgcgg gactctgaca gggagacttc tttatggctg ccctgtgggt
      361 gacacagcag atgctagaat tccaaaccgc cccaaataaa aactgaagaa tatcggctag
      421 gaagctgccc tgcgttcggg agcctcagga ccatcgcggc tgtcctagag ggctgacctg
      481 caatgctatg tatgtaagaa gactcgagca aagcatcatc aaatatatcg cagaattgtg
      541 tccaaatttc agcccagttc ctgcggcgca ggatttacgg tctgcattat gtctggagcc
      601 cgcactgcgc atgcgctcgt cttcctcctc ggctgttctg cgcttgcgtt gggcgtctgc
      661 tcagcctccc tggagcacgg cgaggctgag tactacgtgg ctgccgtgta cgaacaccga
      721 tcggtcctga gcccaaaccc cctggagctc agcagccgcc agcaggccct ggagctcatg
      781 aagcagaacc tcgacgtcta tgaacagcaa gtgatggctg cagcccagaa gggtgcgcac
      841 attatagtgt tcccagaaga cggtatccac ggattcaact tcacaagaac atccatttac
      901 ccattcttgg acttgatgcc atctcccagg ctggtcagtt ggaacccgtg tctggagccc
      961 tttcgcttca atgacacgga ggtcctccag cgcctgagtt gcatggccat caagggaaag
     1021 atgttcttgg tggccaatct tgggacaaaa cagccttgcc tcggcagcga ccctgggtgc
     1081 ccgcaggacg ggagatacca gtttaacaca aacgtcgcgt tcagtgacaa cggaaccctc
     1141 gtcggccgct accgtaagca caacctgtac tttgaggaag ccttcgatag ccctgctgac
     1201 gtggacctca ccacctttga tacgccgttc gcgggcaagt tcggtatgtt cacttgcttt
     1261 gatatcctgt tctttgaccc cgcggtccgg ctcctcagag actttgaggt aaagcacatt
     1321 gcgtacccta cggcctggat gaaccagctg ccgctcttgg cagccattga aatccagaaa
     1381 gcattcgcca ccgccttcgg cgtcaccgtt ctggcagcta acatccacca cccgactctg
     1441 gggatgacgg gcagtggcat acacacccct ctgaagtcct tttggtacca taacatggac
     1501 gaccccgaag gtcaccttat aattgcccgg gtagccacaa acccacaggg cctcgttggg
     1561 acagagaata caactagtga aatggatccg tcccatagga agttcttaaa agtcttgtct
     1621 ggggatccgt actgtgagaa ggatgcccag gaagtgcgct gcgacgaggc tgccaagtgg
     1681 aacctgaacg caccacctac cttccactcg gagatgatgt atgacaattt caccctggtc
     1741 cccgtctggg gaaaggaagg ccacctccag gtgtgctcca acagtctctg ttgccactta
     1801 cttttcgaga ggcccgccct gtccaaagag ctatatgccc tgggtgtctt tgacggactc
     1861 cacacagtgc acggtaccta ctacgttcaa gcctgtgccc tggtcaagtg cgggggcgct
     1921 ggctttgaaa cctgcgggca ggagatctcg gaggccgagg gcttgtttga ctttcatctg
     1981 tgggggaact tcagcacctt gtatgtcttc cctttatttc tcacctcggg gatgacccta
     2041 gacacccctg accagctcgg gtgggagagc gaccactatt tcttgaggaa gaggggactg
     2101 tcctccggcc tggtgacggc agctctctat gggcggttgt atgagaggaa ttaggaaaac
     2161 tgtggtcagc aggttgggct ctgcaggctg gccttgcctt cccacggccc acagatccca
     2221 aacactggga aaaccgcccc gcccctgtgg cactggatcc caccctgggg aactgtaaga
     2281 agatgggaga ggcagttcct ccttcctttc tacataatga ctgagatatt ttctggtatt
     2341 ttctattcac attattcttt ttcaagccac accctcttac cactactaca caattggttt
     2401 taaagactaa gccaaaaaaa aaaaaaaaaa ataaacatca gctgccattc tacaaaccca
     2461 cgggata
//
