LOCUS       XM_006252609            2252 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus biotinidase (Btd), transcript variant
            X1, mRNA.
ACCESSION   XM_006252609
VERSION     XM_006252609.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252609.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006252609.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2252
                     /gene="Btd"
                     /note="biotinidase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 ESTs, 3 long SRA
                     reads, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 107
                     samples with support for all annotated introns"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
     CDS             332..1939
                     /gene="Btd"
                     /codon_start=1
                     /product="biotinidase isoform X1"
                     /protein_id="XP_006252671.1"
                     /db_xref="GeneID:306262"
                     /db_xref="RGD:1305316"
                     /translation="MRRIFFPKRFTVCIMSGARTAHALVFLLGCSALALGVCSASLEH
                     GEAEYYVAAVYEHRSVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVF
                     PEDGIHGFNFTRTSIYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMF
                     LVANLGTKQPCLGSDPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPAD
                     VDLTTFDTPFAGKFGMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEI
                     QKAFATAFGVTVLAANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQ
                     GLVGTENTTSEMDPSHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMY
                     DNFTLVPVWGKEGHLQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQAC
                     ALVKCGGAGFETCGQEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWES
                     DHYFLRKRGLSSGLVTAALYGRLYERN"
ORIGIN      
        1 aaggggcggg acgagaagtc cgtccttggt gaggcgatca tgcgagcacg cccattctcc
       61 agtcagtctt ttccggactc ggccatcagc gggaggcggg acgagccgga gaccgcgtcc
      121 tctaccgagc aggatcagtc ttcaactggc caattttgcc atttggcaaa gagaaaaatc
      181 actgggcaag ttactgcctt gcagttcaag acccatgctt aactagattt ctcatgcagc
      241 ccaggccctc cagcactggt taatagtcat cttcattcgt ccctcgaaga cgtgcccaca
      301 gaccagccca acaaaatccc atgttaccac tatgagaagg attttctttc caaagcgatt
      361 tacggtctgc attatgtctg gagcccgcac tgcgcatgcg ctcgtcttcc tcctcggctg
      421 ttctgcgctt gcgttgggcg tctgctcagc ctccctggag cacggcgagg ctgagtacta
      481 cgtggctgcc gtgtacgaac accgatcggt cctgagccca aaccccctgg agctcagcag
      541 ccgccagcag gccctggagc tcatgaagca gaacctcgac gtctatgaac agcaagtgat
      601 ggctgcagcc cagaagggtg cgcacattat agtgttccca gaagacggta tccacggatt
      661 caacttcaca agaacatcca tttacccatt cttggacttg atgccatctc ccaggctggt
      721 cagttggaac ccgtgtctgg agccctttcg cttcaatgac acggaggtcc tccagcgcct
      781 gagttgcatg gccatcaagg gaaagatgtt cttggtggcc aatcttggga caaaacagcc
      841 ttgcctcggc agcgaccctg ggtgcccgca ggacgggaga taccagttta acacaaacgt
      901 cgcgttcagt gacaacggaa ccctcgtcgg ccgctaccgt aagcacaacc tgtactttga
      961 ggaagccttc gatagccctg ctgacgtgga cctcaccacc tttgatacgc cgttcgcggg
     1021 caagttcggt atgttcactt gctttgatat cctgttcttt gaccccgcgg tccggctcct
     1081 cagagacttt gaggtaaagc acattgcgta ccctacggcc tggatgaacc agctgccgct
     1141 cttggcagcc attgaaatcc agaaagcatt cgccaccgcc ttcggcgtca ccgttctggc
     1201 agctaacatc caccacccga ctctggggat gacgggcagt ggcatacaca cccctctgaa
     1261 gtccttttgg taccataaca tggacgaccc cgaaggtcac cttataattg cccgggtagc
     1321 cacaaaccca cagggcctcg ttgggacaga gaatacaact agtgaaatgg atccgtccca
     1381 taggaagttc ttaaaagtct tgtctgggga tccgtactgt gagaaggatg cccaggaagt
     1441 gcgctgcgac gaggctgcca agtggaacct gaacgcacca cctaccttcc actcggagat
     1501 gatgtatgac aatttcaccc tggtccccgt ctggggaaag gaaggccacc tccaggtgtg
     1561 ctccaacagt ctctgttgcc acttactttt cgagaggccc gccctgtcca aagagctata
     1621 tgccctgggt gtctttgacg gactccacac agtgcacggt acctactacg ttcaagcctg
     1681 tgccctggtc aagtgcgggg gcgctggctt tgaaacctgc gggcaggaga tctcggaggc
     1741 cgagggcttg tttgactttc atctgtgggg gaacttcagc accttgtatg tcttcccttt
     1801 atttctcacc tcggggatga ccctagacac ccctgaccag ctcgggtggg agagcgacca
     1861 ctatttcttg aggaagaggg gactgtcctc cggcctggtg acggcagctc tctatgggcg
     1921 gttgtatgag aggaattagg aaaactgtgg tcagcaggtt gggctctgca ggctggcctt
     1981 gccttcccac ggcccacaga tcccaaacac tgggaaaacc gccccgcccc tgtggcactg
     2041 gatcccaccc tggggaactg taagaagatg ggagaggcag ttcctccttc ctttctacat
     2101 aatgactgag atattttctg gtattttcta ttcacattat tctttttcaa gccacaccct
     2161 cttaccacta ctacacaatt ggttttaaag actaagccaa aaaaaaaaaa aaaaaataaa
     2221 catcagctgc cattctacaa acccacggga ta
//
