LOCUS       NM_001013073            1981 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BTB domain containing 9 (Btbd9), mRNA.
ACCESSION   NM_001013073 XM_215362
VERSION     NM_001013073.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   DeAndrade,M.P., Johnson,R.L. Jr., Unger,E.L., Zhang,L., van
            Groen,T., Gamble,K.L. and Li,Y.
  TITLE     Motor restlessness, sleep disturbances, thermal sensory alterations
            and elevated serum iron levels in Btbd9 mutant mice
  JOURNAL   Hum Mol Genet 21 (18), 3984-3992 (2012)
   PUBMED   22678064
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   DeAndrade,M.P., Zhang,L., Doroodchi,A., Yokoi,F., Cheetham,C.C.,
            Chen,H.X., Roper,S.N., Sweatt,J.D. and Li,Y.
  TITLE     Enhanced hippocampal long-term potentiation and fear memory in
            Btbd9 mutant mice
  JOURNAL   PLoS One 7 (4), e35518 (2012)
   PUBMED   22536397
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087068.1.
            
            [WARNING] On Nov 14, 2024 this sequence was replaced by
            NM_001013073.2.
            
            On Apr 20, 2005 this sequence version replaced XM_215362.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087068.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1981
                     /gene="Btbd9"
                     /note="BTB domain containing 9"
                     /db_xref="GeneID:294318"
                     /db_xref="RGD:1306975"
     exon            1..72
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            73..284
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..1938
                     /gene="Btbd9"
                     /note="BTB (POZ) domain containing 9"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein 9"
                     /protein_id="NP_001013091.1"
                     /db_xref="GeneID:294318"
                     /db_xref="RGD:1306975"
                     /translation="MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEK
                     KRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLRYIYTGRATL
                     TDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCM
                     CCMFMDRNAQEVLASDGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNAKENH
                     AEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEEN
                     IATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINH
                     IRLLLWDRDSRSYSYFIEVSMDELDWIRVIDHSHYLCRSWQKLYFPARVCRYIRIVGT
                     HNTVNKIFHIVAFECMFTNKAFTLEKGLIAPMENVATIADCASVIEGVSRSRNALLNG
                     DTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLLWDCDDRSYSYYVEVSTNQQQ
                     WTMVADRTKVSCKSWQSVTFERQPASFIRIVGTHNTANEVFHCVHFECPEQQSTQKED
                     SSEEPGTGDLSTPSQQLDPHAPRAPSASSLPPSPGPNLHSPNQQNQ"
     exon            285..648
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            649..913
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            914..1133
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..1253
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1363
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1364..1553
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1554..1661
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1662..1740
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
     exon            1741..1955
                     /gene="Btbd9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaattctcct gtggagttga tgagaggacc aggaacagtg tagtgtaaac ccgaactgtt
       61 ggacccttgg aggtcagtga ctatcatctg ttccacacga tgagtaacag ccaccctctt
      121 cgccccttta ctgcagtggg ggaaatcgat catgtgcaca ttttgtctga gcatattggt
      181 gccttgttga ttggtgaaga atatggtgat gtcacgtttg ttgtggaaaa gaagcgcttt
      241 cctgcccaca gggtaatttt agcagcgagg tgccaatatt ttcgagcatt actgtatggt
      301 gggatgcgag agtcgcagcc tgaagcagag atccctctcc aggacactac ggctgaggcc
      361 ttcacgatgc tcctcagata tatctacacg gggcgggcga cactgaccga cgagaaggag
      421 gaggtgctgc tggactttct gagcctggct cataaatacg ggtttccaga gctagaggat
      481 tctacgtccg agtatctctg cactatactt aacattcaga acgtctgtat gacttttgac
      541 gtggccagcc tctactcgct ccccaagtta acatgtatgt gctgcatgtt catggacaga
      601 aatgctcagg aggtgctggc cagcgacggc ttcctctctc tgtccaagac agcacttctg
      661 aacatcgttc taagagattc gtttgctgct cctgagaaag atattttctt agccttgtta
      721 aactggtgta agcacaatgc aaaagagaat cacgctgaaa tcatgcaagc tgtgcgttta
      781 cctctaatga gcctcactga gcttctgaat gttgtgaggc catcaggact cttgtctccg
      841 gatgctattc tagatgccat caaagtgcgg tcggagagcc gggatatgga cctcaactac
      901 agaggcatgc tcatacccga agagaacatt gcaactatga agtatggggc ccaggttgtg
      961 aaaggagagc tgaagtcggc cttgctggac ggtgacactc aaaactatga cttggatcat
     1021 gggttttccc ggcaccccat tgacgatgac tgccgctctg gcattgagat caagctgggc
     1081 cagccatcca ttataaacca catacgtcta ctcctgtggg accgtgacag ccggtcttac
     1141 tcctacttta tcgaagtgtc catggatgaa cttgattgga tccgagtgat agatcactca
     1201 cattacctgt gtcggtcttg gcaaaagttg tatttcccag ctcgtgtctg caggtacatt
     1261 cgaatagttg ggactcacaa cacagtgaac aagattttcc acattgtggc ttttgaatgc
     1321 atgtttacaa acaaagcctt cactctggag aagggcctga tagctcccat ggagaatgtg
     1381 gcaacaatcg ctgactgtgc cagtgtgatt gaaggcgtca gtcggagccg gaatgccttg
     1441 ctgaatgggg acactaagaa ttatgactgg gactctggct acacgtgcca ccagctggga
     1501 agtggcgcca ttgtggttca gctggcacag ccatacatga ttggctcaat acggttatta
     1561 ctctgggact gcgatgaccg aagctacagc tactatgttg aggtttccac caatcagcag
     1621 cagtggacca tggtggctga cagaacgaag gtgtcgtgca agtcctggca atcagtcact
     1681 tttgaaagac agcctgcgtc cttcatccga atcgtcggaa cgcacaacac cgcgaacgag
     1741 gtgttccact gtgtccactt cgagtgtccg gagcagcaga gcacccagaa ggaagacagc
     1801 agtgaggagc cagggacagg ggacctcagc accccaagtc agcagctgga ccctcatgca
     1861 ccgagggcac ccagcgccag ctcactaccg ccgagtccgg gccccaactt acactcaccc
     1921 aaccaacaga atcaataaag caggcagagg acataaaaaa aaaaaaaaaa aaaaaaaaaa
     1981 a
//
