LOCUS       NM_001108720            4062 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BTB domain containing 7 (Btbd7), mRNA.
ACCESSION   NM_001108720 XM_001067530 XM_001067582 XM_343098
VERSION     NM_001108720.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4062)
  AUTHORS   Onodera,T., Sakai,T., Hsu,J.C., Matsumoto,K., Chiorini,J.A. and
            Yamada,K.M.
  TITLE     Btbd7 regulates epithelial cell dynamics and branching
            morphogenesis
  JOURNAL   Science 329 (5991), 562-565 (2010)
   PUBMED   20671187
REFERENCE   2  (bases 1 to 4062)
  AUTHORS   Pan,W., Zhang,Q., Xi,Q.S., Gan,R.B. and Li,T.P.
  TITLE     FUP1, a gene associated with hepatocellular carcinoma, stimulates
            NIH3T3 cell proliferation and tumor formation in nude mice
  JOURNAL   Biochem Biophys Res Commun 286 (5), 1033-1038 (2001)
   PUBMED   11527404
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473982.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001067582.1, XM_343098.3, XM_001067530.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132263
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4062
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..4062
                     /gene="Btbd7"
                     /note="BTB domain containing 7"
                     /db_xref="GeneID:362772"
                     /db_xref="RGD:1306262"
     exon            1..190
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..3048
                     /gene="Btbd7"
                     /note="BTB (POZ) domain containing 7"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein 7"
                     /protein_id="NP_001102190.1"
                     /db_xref="GeneID:362772"
                     /db_xref="RGD:1306262"
                     /translation="MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLY
                     SLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALV
                     EEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAIL
                     AARCPFFKTLLSSSPEYGAEIIMDISTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVD
                     ILVQLSEEFGTPNSLDVDMRGLFDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKA
                     HKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYT
                     DVVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDI
                     IAESISLETLIAILKWSSHPYGSKWVHRQALHFLCEELSQVMTSDVFYELSKDHLLTA
                     IQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDMEE
                     LREILSSLLPFVRIEHILPMNSEVLSDAMKRGLISTPPSDMLPTTEGGKSNAWLRQKN
                     AGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAMPQCCH
                     MISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGA
                     TVSYEIQIRVLREFGLADAAAELLQCPQPVLNDLMPDIAMGVSTLSLKDRRLPELAAD
                     TELCQTVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKPDGRESQQEYPDLYDFPNAA
                     CRPSTPAPGRRTPSPSRGRYFGPDLYSHNKASPNGLKSAYLPGQTSPKKQEDTRREYP
                     LSPDGHPHKQKNEPIRLDVVEQPPQRPDFPSAASENASNGPAHVRARTAVETDLTFGL
                     TPNRPPSHSACSSEVLEERSSRRLTDSESLGHGAQRNADLERDDSISRGRRSPSKPDF
                     LYKKSAL"
     exon            191..1270
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1271..1479
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1480..1555
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1556..1716
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1717..1860
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            1861..2050
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            2051..2229
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
     exon            2230..4062
                     /gene="Btbd7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaaatggat gaaaagaggc tgctggatcc agggttgaag gttcgtaaag gcctctggga
       61 ttaccctctg aagaaccagc agatggaatg ccagagtgac tgaagaaaat gggtgctaat
      121 gcatctaact atcctcattc atgttcccca agggtagggg gaaattcaca ggcccagcag
      181 actttcatag gaacatcttc ctattctcag caaggctatg gttgtgagtc aaagttgtat
      241 agccttgacc acggccatga aaaaccacaa gacaaaaaaa agagaacctc tggccttgct
      301 actctcaaaa agaagttcat taaacgtcga aaatctaata gatcggctga tcatgcgaag
      361 cagatgcgag aactcctgtc tgggtgggat gttagagatg tcaatgcact agtggaagaa
      421 tatgagggga cttcagcctt aaaggagctt tctctgcaag ccagtttggc tagaccagaa
      481 gctcggacac tgcagaagga catggctgac ctttatgagt ataagtactg tactgatgtg
      541 gacttaatat ttcaagaaac ttgtttccct gttcatcgtg ccattttggc agccaggtgt
      601 ccatttttca aaacactgct atcttcctca cctgagtatg gggcagagat aataatggat
      661 atcagtacag ctggtattga tatgcccatg ttttctgcct tgttacacta cctttataca
      721 ggagaatttg gaatggagga ctcaagattt cagaatgtcg atatccttgt tcagcttagt
      781 gaagaatttg gaacaccaaa ttcccttgat gtagatatgc gtggactctt tgattacatg
      841 tgttattatg atgttgtcct tagtttttct tcagattctg aactagttga agcttttggt
      901 ggaaatcaga actgtttaga tgaagagctc aaagcccaca aggctattat ttctgcacgg
      961 tccccatttt tccgaaattt attacaaagg agaatacgga ctggtgaaga aatcacagac
     1021 cgaactttga gaactcctac aagaattata ttagatgagt ccattatacc aaaaaaatat
     1081 gcaaaagtga tattacactg tatgtatacc gatgtggtgg acctctctgt tttgcactgc
     1141 agcccctctg tggggagtct cagtgaagtt caagctctcg tcgcagggaa gccaaacatg
     1201 accagggcag aagaagccat ggagctttac cacatagccc tgttcttgga atttaacatg
     1261 cttgcacaag gctgtgagga tatcattgct gagagcatct ccttagagac cttaattgct
     1321 atcctcaagt ggagctcaca tccgtatggt tctaagtggg tgcaccgaca agctttgcat
     1381 ttcctttgtg aggaattatc ccaggtcatg acttcagatg ttttttatga actcagcaaa
     1441 gaccatctgc ttactgctat ccagtctgac tacctacagg caagcgaaca agatatcctt
     1501 aaatatctga ttaaatgggg tgagcatcag ttgatgaaga gaatagcaga cagagagcca
     1561 aacctcctga gcggcactgc acatagtgtg aacaaaagag gtgtgaagag aagagacctg
     1621 gacatggaag aactcagaga gatcctttct tctctcctgc cttttgtgcg aattgaacac
     1681 atcttaccta tgaacagtga ggtcttaagc gatgcaatga aaagaggctt gatcagtaca
     1741 cccccatcag atatgcttcc tacaacagaa ggggggaaat caaatgcctg gcttcggcaa
     1801 aaaaatgctg gcatatatgt tcgtcctcgg ctgttttctc cgtatgtgga agaagcgaag
     1861 tcggtgctgg atgagatgat ggtggagcaa acagacctgg tgcgactccg aatggtgcga
     1921 atgtccaacg ttccagacac actttacatg gtcagcaatg ccatgcccca gtgctgccac
     1981 atgatcagcc accagcagat cagcagtaac cagtcaagcc ctccatcagt tgtagccaat
     2041 gaaatcccag ttcctcgtct cctcattatg aaggacatgg tgaggcgcct gcaggaactg
     2101 cggcacacag agcaggtgca gagagcctat gcactgaact gtggggaagg cgccaccgtc
     2161 agctatgaga tccagatccg agtgctcaga gagtttggtc ttgcagatgc tgctgcagag
     2221 ctcctgcagt gtccacagcc tgtgctgaat gatctgatgc cagatatcgc catgggggtg
     2281 tctacattgt cactcaagga caggaggctc ccagagcttg ctgcagacac agaattatgc
     2341 cagacagttt ccgaagcagg accagggcct ccccagcatc tctcatgtat tccacagaga
     2401 catacacaca cgtctcggaa aaaacacaca ctagagcaga aaccagacgg tagagaaagt
     2461 cagcaggaat acccagatct ctatgacttc ccaaatgctg cctgcaggcc ttccactcct
     2521 gctcctggca gacgcactcc ttccccttct cgtggtagat attttggtcc ggacttgtac
     2581 agccacaata aggcatcacc aaatggctta aagtcagctt acctacctgg tcagacctct
     2641 cctaaaaagc aggaagacac taggagagaa tatccacttt ctcctgatgg gcatccacat
     2701 aagcagaaga acgagccaat acgcctggat gttgttgagc agcctccaca gaggccagac
     2761 ttcccttcag cagcctcaga aaatgctagt aatggtccag cccatgtcag ggcacgaact
     2821 gcagtagaaa ctgacttgac ttttgggctg acacctaaca gacctccttc ccattctgca
     2881 tgtagctctg aagttctcga agagcgatct agtagaagac tgacagacag tgagtccctg
     2941 ggccatggag ctcagagaaa tgcagatctg gaaagggacg attccattag cagagggagg
     3001 aggtcgccaa gtaaaccaga cttcctctac aaaaagtctg ccctctgaag tagcttccaa
     3061 gtctgtgcct gagatgtgaa acatcccgtc ttatgatgta acccaacaac ttactgaccg
     3121 gtttgtcgat gccagctcag tttcacatgt tatcgtagct tctgtgtgta tgtgtttatt
     3181 agacatggca tgctaagggg attgttttga acgctgcatc tgtctttcgt gtttaacagt
     3241 tgtgtgggga gcatcttcaa gagcaagcaa gctggcactt tctctttaca gatgactttt
     3301 tgcacttgta cattttattt gtattgattt tataacagtg tgttaaactt tattgctaca
     3361 tttaaaggac tgtattttca tactttttgc attttaccta tcatctacca gtttccatgt
     3421 gcattgggtt gcacactaag atgtattttc ttacaaaata gttgtgttta ttttttaatt
     3481 atagaaattc caaagaacag cacatcaatc gctcctctct tttttggtga ttgtttccgt
     3541 tgagaaatct tcctgctcag tctccataaa tccaatgtca ttctttttta taagtcttga
     3601 aagccagtct tcattcccca cagcagaagt ccaggtcttg atgctttttt gattcagtaa
     3661 agaacaagga ggaaagccct gatatccagc ctgtggctgc tatttaatta cagtgcggtt
     3721 ttgtcgggaa ccctgtagat tctggagtag agctactcac tcaaatggca taaggaaagt
     3781 aggctttagt attaaaaaac agtagtgctg ggctcagtgg aaatgtgtac actggcagtc
     3841 ccagcccatg ggagtggaga cagccggtca gaagttcaag gttgtttcag gctacgtagt
     3901 aagttcaaga ttagactgga tgtctgagct ctgcctccaa aaacagtagc agaggtggtg
     3961 acatcacaca cagggcacac tgcactgatg gggtgcctgg ctctgcatat gactcactat
     4021 actgggggaa atgactgcct gtggttgtct tgcattttgt gg
//
