LOCUS       NM_001399059            2417 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus BTB domain containing 19 (Btbd19), mRNA.
ACCESSION   NM_001399059 XM_002729514
VERSION     NM_001399059.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000162.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399059.2.
            
            On Dec 30, 2021 this sequence version replaced XM_002729514.6.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR8487226.150131.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840111 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-338               JACYVU010000162.1  45153282-45153619   c
            339-540             JACYVU010000162.1  45151854-45152055   c
            541-594             JACYVU010000162.1  45151683-45151736   c
            595-654             JACYVU010000162.1  45149930-45149989   c
            655-723             JACYVU010000162.1  45148972-45149040   c
            724-855             JACYVU010000162.1  45148742-45148873   c
            856-981             JACYVU010000162.1  45148516-45148641   c
            982-2417            JACYVU010000162.1  45146970-45148405   c
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2417
                     /gene="Btbd19"
                     /note="BTB domain containing 19"
                     /db_xref="GeneID:100361234"
                     /db_xref="RGD:2320529"
     exon            1..338
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     CDS             253..1113
                     /gene="Btbd19"
                     /note="BTB (POZ) domain containing 19"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein 19"
                     /protein_id="NP_001385988.1"
                     /db_xref="GeneID:100361234"
                     /db_xref="RGD:2320529"
                     /translation="MENPGLVVRGQAAPFSTALRSLINNPRYSDICFVVGQERQEVFA
                     HRCLLACRCNFFQRLLGPGIPSPVVLSTVPAEAFLAVLEFLYTNSVKLHRYSVLEVLT
                     AAVEYGLEELRELCLEFVVKVLDVELVCEALQVAVTFGLEPLQKRCIAFIETHSQEAL
                     RTRGFLELSATALLPVLRSDKLCVDEAELIQAARSWARVGAAVLEQPVAEVAAPVVRE
                     LRLALLAPAELSALEEQNRREPLIPVEQIVEAWKCHALRRGDAARSALCRRRRGTLPR
                     DHHRFLDLRF"
     exon            339..540
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     exon            541..594
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     exon            595..654
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     exon            655..723
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     exon            724..855
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     exon            856..981
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
     exon            982..2417
                     /gene="Btbd19"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atccaccacc agcttctccc gtgatcttag gcctttccag ccccggaact tctgtgggtc
       61 tcctccgcat ctgcatccct ttccggaacc tcaggactac tttagggacc cgggcctctg
      121 ttctcctaca ttttagctcc tcagcaaaca ggtctccagc tcctgccctc cctctcaggt
      181 ctcttaggtc tttgttggcc tggctgtgtc ttctgggctg ttcaacactt tgacctgctg
      241 cccactccac gtatggagaa cccaggactg gtggtgcgtg ggcaggctgc acccttttcc
      301 acagcacttc gaagcctcat caacaacccc cggtacagtg atatttgctt tgtggttggt
      361 caagaacggc aagaggtgtt tgcccatcgg tgcttgttgg cctgcagatg taacttcttc
      421 cagagacttt tgggacctgg gatacctagt cctgtggtgc taagcactgt gccggccgaa
      481 gccttcttag ctgtgctgga gttcctgtat accaacagtg tcaagctgca tcgatactct
      541 gtgctggagg tgctcacagc agctgtggag tacgggctgg aggaactccg agagctatgc
      601 ctggagtttg tggtgaaggt gctggatgtg gaattggttt gtgaggctct gcaggttgct
      661 gtaacctttg gtctggagcc actacagaag cggtgcatag ccttcataga gactcacagc
      721 caggaggcgc tccgcacccg tggcttcctg gagctgtccg ccaccgcact gcttcccgtg
      781 ctacgcagtg acaagctctg cgtggacgag gctgagttga ttcaggcagc ccgaagctgg
      841 gcacgtgtgg gcgccgcggt gttggagcaa cccgtggccg aggtggcagc tccagtggtt
      901 cgagagctga gattggctct gctcgcccca gcggagctaa gcgccctgga agaacagaac
      961 cgacgggagc ctctcattcc ggttgaacaa attgtggagg catggaagtg ccacgcccta
     1021 cgcagaggag atgcggcccg gagcgcactg tgccgccggc ggaggggcac cttgcctcgg
     1081 gatcaccatc gttttctgga ccttcgtttc taatgatcca cttccggatc gttctaggac
     1141 gttaaccact ccccaaacta cagttcccag ggtgctattc gctggaggtg gtcttccttt
     1201 cccagcaagc tcagcagccg gatacgggaa ggaccgtttt ttgcgtctgg agtaatagct
     1261 aaagcctccg tgggagagta gggtttggac agtgggccca aggggctaga ctgtgggctt
     1321 gggtgatgtc ctgagaccgg aaacgggggt ggcctttgtt gcatgagctc atgcttcttc
     1381 aagtcggtct gcacccctgt actcgggtga cgctctattt agctcatcct ctttaacaaa
     1441 ccagcttcct ggctccaggc tcagcgcaga tttgagcttc tcactttccc agccctggaa
     1501 atagtgtttg tttttttctg tgggtctgga gcccggacct cttccttacc tacctcatgc
     1561 cttgtctccc tcttaatact acttcctcgt tggtttagtc tgaagcctat ctttcatcac
     1621 attttggggt attttctacc actaccccag ccagtgcccc tcactccttt ccccctcggg
     1681 gttacaatat tccctatgat ggtcccatgc catgattgtc aagcatttcc tcctgagttc
     1741 tttccagaca agctactaaa ttccttgaga tttagcaatc agaaattctg cgtttgggag
     1801 ttccaggatt attggtgggt gggggaggtg tggacaatct ctcactgcaa ccccagctat
     1861 ttaggaccgg ttagctttga gatcatagtg ctcgctctct ggctgcctct gccttcctgg
     1921 tatggagatt aaaggcatgt acgcactacc gctccccgat aaattaaaaa caaaaaagca
     1981 gggtgggaaa gacggtatac gcctttaatc caagcagttg gggagcagag aaaggcgatc
     2041 tctgcaaatt tgagaccaac ctggtctact acagagtaaa ttccaggaaa tccagggcta
     2101 gaaccactgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtaatgtatg
     2161 cagggctaga accactgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     2221 gtaatgtatg cttttaccac tttatccagc aaattttctt ggttttgttt ttcaaaagaa
     2281 cagcacccct cagctcccag taaataattg taaaggagtt ataaagcaaa gatctaaaaa
     2341 atgaagacta gtggacaatt taaaaagaaa taaaataact ctagccttat atgaaaatat
     2401 attgcttatg aattaaa
//
