LOCUS       XM_039092483             673 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus bone marrow stromal cell antigen 1
            (Bst1), transcript variant X5, mRNA.
ACCESSION   XM_039092483
VERSION     XM_039092483.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092483.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..673
                     /gene="Bst1"
                     /note="bone marrow stromal cell antigen 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 41 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:81506"
                     /db_xref="RGD:620344"
     CDS             38..658
                     /gene="Bst1"
                     /codon_start=1
                     /product="ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
                     2 isoform X3"
                     /protein_id="XP_038948411.1"
                     /db_xref="GeneID:81506"
                     /db_xref="RGD:620344"
                     /translation="MAVQACALSLRLGLWMSLLLPVLPGAGARAAGARWSGEGTTPHL
                     QSIFLGRCAEYTTLLSLEPGNKNCTAIWEAFKVVLDKDPCSVLPSDYDLFINLSRHAI
                     PRDKSLFWENNHLLVMSYAENTRRLMPLCDVLYGKVGDFLSWCRQENASGLDYQSCPT
                     AEDCENNAVDAYWKSASMQLWSMSLPAGTQLFRVPKRLSTCGPKWG"
ORIGIN      
        1 ttcaggaggt cactggctaa aggaatcagt ttccctgatg gcggttcaag catgcgcgtt
       61 gtctctacgg ctggggctgt ggatgtccct cttgctgccg gtactgccgg gggcgggggc
      121 gagagctgct ggagcgcggt ggagcgggga gggtaccacg cctcacctcc agagcatctt
      181 cctgggccgc tgtgcggagt acaccacgct gctgagcctt gagccgggga acaaaaactg
      241 cacagccatc tgggaggcct tcaaggtggt gctggacaag gatccctgct ctgtgctccc
      301 ctcagactat gatctcttca ttaacctgtc caggcacgcc attcctaggg acaagtcact
      361 gttctgggaa aataaccacc tactggttat gagctatgca gagaacaccc gccgccttat
      421 gcccctgtgt gacgttctgt atggcaaggt tggagatttc ttgagctggt gtcgacagga
      481 aaatgcctct ggacttgatt accagtcctg ccccacagca gaagactgtg aaaacaatgc
      541 cgtggatgcc tattggaaaa gtgcatccat gcagctctgg tccatgtccc tgccagcggg
      601 gacccagtta ttcagggtcc cgaagaggct ttctacctgt gggccaaaat gggggtgaag
      661 agaagaagga gac
//
