LOCUS       NM_001106636            2687 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus BSD domain containing 1 (Bsdc1), mRNA.
ACCESSION   NM_001106636 XM_001061273 XM_001061326 XM_001061389 XM_216348
VERSION     NM_001106636.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001061273.1, XM_001061389.1, XM_216348.4, XM_001061326.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132262,
                              SAMD00132264 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2687
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /note="BSD domain containing 1"
                     /db_xref="GeneID:297890"
                     /db_xref="RGD:1311622"
     exon            1..34
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..1307
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /codon_start=1
                     /product="BSD domain-containing protein 1"
                     /protein_id="NP_001100106.1"
                     /db_xref="GeneID:297890"
                     /db_xref="RGD:1311622"
                     /translation="MAEGEDVGWWRSWLQQSYQAVKEKSTEALEFMKRDLTEFTQVVQ
                     HDTACTIAATASVVKERLATEGSSGATEKVKKGLSDFLGVISDTFAPSPDKTIDCDVI
                     TLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPDGPPELFDAWLSRFCLEEKKGEIS
                     ELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQRADQSISEE
                     PGWEEEEEELERIVPSPKEAKLPQETKTSTAPENEPAPQSPCEEIPVEAPAEATPSES
                     SESISLATQIANPAAAPQPPELPKDLSQKLLEASLEEQSLAEDAGETGPPPPVTSKPL
                     TPAGRASGLEPRPPARVETLREEVPTDLRVFELNSDSGKSTPSNNGKKGSSTDISEDW
                     EKDFDLDMTEEEVQMALSKVEASGELEDVEWEDWE"
     exon            35..95
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            96..212
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            213..380
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            381..435
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            436..551
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            552..620
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            621..699
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            700..1170
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            1171..1274
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
     exon            1275..2687
                     /gene="Bsdc1"
                     /gene_synonym="RGD1311622"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtggtgatg tcatgctggc aagatggcgg aaggggagga cgtggggtgg tggcggagct
       61 ggctgcagca gagctaccag gcagtcaaag agaagtccac tgaagctttg gagttcatga
      121 agcgcgacct gacagagttt acccaggtgg tacagcatga cacggcctgc accatagcag
      181 ccacggccag tgtggtgaag gagaggctgg ccactgaagg ctcctcggga gcaacagaaa
      241 aagtgaagaa gggattatcc gacttcttag gggtgatctc agataccttt gccccctctc
      301 cagacaaaac catcgactgc gatgtcatca ccctgatggg tacaccctct ggcacagctg
      361 agccatatga tggcaccaag gctcggctct acagtctgca gtcagacccg gcaacatact
      421 gcaacgagcc cgacgggccc ccggaattgt ttgatgcctg gctttcccga ttctgcttgg
      481 aggagaagaa aggggagatc tcagagctcc ttgtaggcag cccctccatt cgagccctct
      541 acaccaagat ggttccagca gctgtttccc attcagaatt ctggcatcgg tatttctata
      601 aagtccacca acttgaacag gagcaggccc ggagggatgc actgaagcag cgggcagacc
      661 agagcatctc tgaagagcct ggctgggagg aggaagaaga ggagcttgaa cgcattgtac
      721 catctccaaa agaggcaaag cttccacaag agactaaaac ttctacagcc cctgaaaatg
      781 agccagcccc ccagagccct tgtgaagaga ttccagtgga ggcccctgca gaggctaccc
      841 catcagagag cagtgagagc atctccctcg ccacacagat cgcaaaccca gcagctgcac
      901 ctcagccacc agagctacct aaagacctgt cccaaaagct gctcgaggcg tctttggaag
      961 aacagagtct ggctgaggat gcgggtgaaa ctggaccccc accccccgtt acctccaagc
     1021 ctctaacccc tgcaggccga gccagtggcc tagaacccag gcctccagcc agagtagaga
     1081 ccctgagaga agaggtgccc acagacttaa gagtgtttga gctgaactca gacagtggga
     1141 agtcaacacc ctccaacaat ggcaagaaag gctcaagcac ggacatcagc gaggactggg
     1201 agaaggactt tgacttggac atgactgaag aagaagtgca gatggcactt tccaaggtgg
     1261 aagcctctgg ggagcttgaa gatgtagagt gggaggactg ggaatgaggg gagccggagc
     1321 aagcagctcc cccacccacg gcacatccct cctccctcgc tcgatcctca gtcagccttg
     1381 gaagacactg agaatgtccc cacaaatggc ctctgccatc cagaacttcg aacatattct
     1441 ggtggctccc tgctggccct ctgctcacac cttggaagag cctttttaaa tacagatcca
     1501 gaagtctgat ttgtgccaac cttaggatga cctaaggcga ggacccaccc tgcccccatc
     1561 accggagagc ctgcatttcc ctgctattgt ggggatccct actgggaaac ctccaggggg
     1621 cagctgtctc ctgcagagac aagagctgaa gccctggtct ctttgaagac aacacacact
     1681 accccataaa gctagtaaag tcagcaagga aggccatgcc acctgccctt gactacccag
     1741 gaacactgga cgacggcttc attcctgtcc cagggaggaa ggggcagtca tctctgggac
     1801 acctgcctct gggatcgcca tcccaaccat ttcccattcc tgggaagtcc tatgggctca
     1861 gaatcctaag accaaacctt aactcttctc cagtccacac cgggatatcc ctacaccttc
     1921 ccagggcttt tatgtcacat gcacccaagt ccttagccca tctgtgccac tgcaagagtc
     1981 tgctcttgta tttccctccc tccccaggaa gggaggagcc actttcaggc ccttcggtgt
     2041 gttgcctggt aggataatgg ctccaagcag ctacctacct accttgactc ccatagctta
     2101 ggacaagtct gctatgaact atatgtagtg aacagagagg agtactcaca ggccagcccc
     2161 tcctcagccc tctgttcttg aggggatatg ctgggatgag catcctgaga ctatctcctg
     2221 cagaggccct ccttcctgaa gacagtcagc ctggggctct taccatccgg agacagtgag
     2281 ggccgcatga agacctggtg cacagatgct gctctggtga tgctgtatgc tggcacaccc
     2341 accagtgact catttaaagg agcttggtca ggacgctatg aatggtgggc acttcaaacc
     2401 ttcagtgaag gggatagggt ggacagaatg ctaaattttt tttgatggga tgggtttttc
     2461 tctttgtaat tattttaatt aaccttttgg ttgtttgtgc aatattatat attttaaatt
     2521 ataatgcatc tccccagagt attttgtagc tgggaaaaga aaaaaaaaag taaagaaaaa
     2581 attctaacag ctgttagttt tgtaattaaa aaggaacaaa aataaaagaa gtttgtcctg
     2641 agccttttac agatttgcca taacagcatt aaagtgattg aacaaaa
//
