LOCUS       NM_001317348             993 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus BRICHOS domain containing 5 (Bricd5), mRNA.
ACCESSION   NM_001317348
VERSION     NM_001317348.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.521574.1,
                                           SRR26360181.2713774.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-372               JAXUCZ010000010.1  14003276-14003647
            373-528             JAXUCZ010000010.1  14003772-14003927
            529-630             JAXUCZ010000010.1  14004000-14004101
            631-784             JAXUCZ010000010.1  14004351-14004504
            785-993             JAXUCZ010000010.1  14004601-14004809
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..993
                     /gene="Bricd5"
                     /note="BRICHOS domain containing 5"
                     /db_xref="GeneID:681370"
                     /db_xref="RGD:1596720"
     exon            1..372
                     /gene="Bricd5"
                     /inference="alignment:Splign:2.1.0"
     CDS             304..879
                     /gene="Bricd5"
                     /codon_start=1
                     /product="BRICHOS domain-containing protein 5"
                     /protein_id="NP_001304277.1"
                     /db_xref="GeneID:681370"
                     /db_xref="RGD:1596720"
                     /translation="MLTLLTAGAVAGGLLGFTYSPSKPLLQMLRKTFLSSRVPWPNQT
                     TLVDVAQNMATIMVTPFQSNHSWAVLFDGQSGYICYRPAEHQACFLRLMEAQDWETLQ
                     LLLNTSRAQESHVPGQDTHYAQELLAVLGGHAVDPTQVGASVQHLCADTPIYWARWAE
                     GPQRQRLIYLCIDICFPSNICVSVCFYYLPD"
     exon            373..528
                     /gene="Bricd5"
                     /inference="alignment:Splign:2.1.0"
     exon            529..630
                     /gene="Bricd5"
                     /inference="alignment:Splign:2.1.0"
     exon            631..784
                     /gene="Bricd5"
                     /inference="alignment:Splign:2.1.0"
     exon            785..993
                     /gene="Bricd5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactcctcca aggggctgca gacaatcagt gcattgtcag caggggctgc agcatgaagc
       61 aggggcacat cctcactgag agcctcaggt ccaagcctgt tgaggtaagt ctctaccacc
      121 cccaagacaa gaactcaggg atgccatagg aggagacagg agtcaccacc taccatcctc
      181 agccctttcc ctgagcaagt cggctcccga gtctctaagc ccgaagcccc acagctagta
      241 ctgtgccctc aggtgaagac caaaccctgc tacaggggct ggagagcagc aggcttgctg
      301 ctgatgctga cactgctcac tgcaggggcc gtggctggag ggcttcttgg tttcacatac
      361 agcccttcca agccattgct gcagatgctc cgaaagacct tcctgagctc ccgggtaccc
      421 tggcccaatc aaaccactct agtggatgtg gcccagaaca tggcgaccat catggtgact
      481 ccgtttcaga gcaaccacag ctgggctgtg ctcttcgacg ggcaaagtgg ctacatctgt
      541 taccgccctg cagagcacca ggcctgcttc ctccgtctga tggaagccca agattgggag
      601 accctgcagc tgctgctgaa cacttccagg gcccaagagt cacatgtacc tggccaggac
      661 acccactatg cccaggaact gctggcagtt ttgggaggcc atgctgtgga ccctacccaa
      721 gtgggagctt cagtgcaaca cctttgtgca gacactccta tctactgggc ccggtgggca
      781 gaggggcccc agagacagcg gctgatctac ctctgcattg acatctgctt cccgagcaac
      841 atctgcgtgt ctgtctgctt ttattacctc ccagactaag accccctacc aagtcctccc
      901 gacctttgct cccacaggtc agccagctgc caggtcacca gtacctttgg aaggcagctg
      961 acggtaggga tgaataaacc cagattgcct ggc
//
