LOCUS       NM_001106773            2228 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BPI fold containing family C (Bpifc), mRNA.
ACCESSION   NM_001106773 XM_001079379 XM_235012
VERSION     NM_001106773.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Bingle,C.D., LeClair,E.E., Havard,S., Bingle,L., Gillingham,P. and
            Craven,C.J.
  TITLE     Phylogenetic and evolutionary analysis of the PLUNC gene family
  JOURNAL   Protein Sci 13 (2), 422-430 (2004)
   PUBMED   14739326
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473960.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001079379.1, XM_235012.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760389
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..2228
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /note="BPI fold containing family C"
                     /db_xref="GeneID:299685"
                     /db_xref="RGD:1311686"
     exon            1..67
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     CDS             68..1597
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /note="bactericidal/permeability-increasing protein-like
                     2"
                     /codon_start=1
                     /product="BPI fold-containing family C protein precursor"
                     /protein_id="NP_001100243.1"
                     /db_xref="GeneID:299685"
                     /db_xref="RGD:1311686"
                     /translation="MRTKQVPVLGACFLLWSLYIASSQTVYPGIKARITQRALDYGLQ
                     VGMEILEQLAKEIVIPDLNGSESLKFLKIDYVKYNFSNIKINAFSFPNTSLAFVPGVG
                     IRALSNHGTANISTNWDVKAPLFQDSGAADLFLSGIYFTGIIVFTRNDFGHPALELQD
                     CHVQVSHARVSFSGGLSVLYNSFAEPMEKPILKNLNEMVSLCPIAISQVEEFNVNISA
                     LEVLTKIDNYTVLDCSLISPPEVTENHLDFHLKGAFYPLESLVDPPFTPAPFELPESR
                     DSMLYIGVSEYFFKSASFAHFVSGALGTVLSTREISNYFNQNAQGIGSVLSKIAEIYI
                     LSQPFMLQIMATGPPVVNLHPNNFSLELPAAVIMLTQPENSTIQPIVSMDFVASTSVG
                     LAILGQKLICSLSLNRFRLSLPENSPRDIKVVRFENILSSILHFGVLPLANTKLQQGF
                     PLPNPYNISFVNSDIEVLEGFLLISTDVAHETSSKQQPNLHSWGHLNMVHGPRKKQPI
                     H"
     exon            68..191
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            192..312
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            313..441
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            442..597
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            598..667
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            668..728
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            729..820
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            821..997
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1051
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1222
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1290
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1333
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1397
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            1398..1474
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
     exon            1475..2228
                     /gene="Bpifc"
                     /gene_synonym="Bpil2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cactcctgct tcgaaggtga agggagctga agatactccc cagttttgga ctcatcccga
       61 gcttgagatg cgaacaaagc aggtcccagt cctcggggca tgcttcctcc tgtggagtct
      121 ctacatcgcc tcctcccaga ctgtttaccc tggaatcaag gcgaggatca cccagcgtgc
      181 actcgactat ggtcttcaag ttgggatgga gatactggag cagctggcaa aggaaatcgt
      241 catcccagat ttgaacggtt ctgagtctct taagtttctg aagatcgact atgtaaagta
      301 caacttctca aacataaaaa tcaatgcctt ttcattccca aacacctcac tggcctttgt
      361 acctggggta ggaatcagag ctctgagcaa tcacggcact gccaacatca gcaccaactg
      421 ggacgtcaag gctccacttt tccaagactc gggagctgcc gatctgtttc tctctggaat
      481 ctactttacc ggcatcatcg tcttcacccg gaatgacttt ggtcacccag ctctggaact
      541 gcaagactgc catgtacaag tgagccacgc ccgagtctca ttttctggag gcctcagtgt
      601 cctgtataac tcctttgctg agcccatgga gaaacccatt ctgaagaatt taaatgaaat
      661 ggtgagtctt tgtcccattg ccatcagcca agtggaagag ttcaacgtca acatcagcgc
      721 gctggaggtt ttaaccaaga ttgacaacta cactgtgctg gattgttctc tgatcagtcc
      781 tccggaagtc actgagaacc accttgactt tcatttgaag ggtgcgttct acccactgga
      841 aagccttgtt gaccctccct tcacaccagc tcccttcgag ctcccagaga gcagagattc
      901 catgctctac attggcgtct ctgagtactt cttcaaatct gcatcatttg ctcactttgt
      961 atctggggcc cttggtactg tgctgtccac cagggagatt tccaactatt tcaatcaaaa
     1021 cgctcaagga attggcagcg tgctctccaa gattgcggag atctacatct tgtcccagcc
     1081 attcatgctg cagatcatgg ccacagggcc tcctgtggtc aacttacacc caaacaattt
     1141 cagcctggag ctccctgccg ctgtcatcat gctcactcaa ccggagaact ctaccatcca
     1201 acccatcgtc tccatggact ttgttgctag taccagtgtt ggcctggcta ttttgggaca
     1261 aaaactgatc tgctccttat ctttgaacag attccgcctc tctttgccag agaacagccc
     1321 acgggatatt aaggttgtga gatttgagaa tatcctgtct tccattcttc acttcggagt
     1381 cctcccactg gccaacacaa aattgcagca agggtttcct cttcccaacc cctacaatat
     1441 ctcattcgtc aactcggata ttgaagttct tgagggtttc cttctgattt ctactgacgt
     1501 ggcacatgaa acatcctcaa agcaacagcc aaatctccac agctgggggc atctgaacat
     1561 ggtacatgga ccacggaaaa aacagccaat ccactgacgg cctgtgcgca acctacccca
     1621 ggaagtaaac agccttcagt cccacagaaa cagtaaactg gaaagtgaag gcaccttggg
     1681 tattaaagcc cttgtgaaaa cagtctcttt ctggagccct aagagaccta aagtgaggcc
     1741 gactaagttc aagtgcggaa cagggacaag gtagtgggag tgggaatcta tgtatgtgag
     1801 catatgtaag cacgttgtgt gcctgtgttt atcatttgtg ggaaagagtg gggcatgtgg
     1861 atctgaccag gtgggtaagg aactgtgtgt gtgtctgtct ctctctctgt gtctgtctgt
     1921 ctttctctgt gtgtctgtct gcctgtctct ctgtgtgtct gtttgtctgt ctctgtgtgt
     1981 gtctgtctct gtgtgtgtgt gtgtctgtct gtctgtctct ctctctctct ctctctcgtg
     2041 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtatgtgtg taagactgtc ttctctactt
     2101 tcgttggact ttgtgtttta tgtttactat tactgtcctg tgtcctgtgc ttaattaaaa
     2161 ttgttttcta tcaatgtcag tacctgtgtg tgaaagctcc tgccctgaat ttattttaat
     2221 aaaatatg
//
