LOCUS       NM_001109208            1771 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BPI fold containing family B, member 3 (Bpifb3),
            mRNA.
ACCESSION   NM_001109208 XM_001063849 XM_575268
VERSION     NM_001109208.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Bingle,C.D., Seal,R.L. and Craven,C.J.
  TITLE     Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a
            subfamily of the BPI fold-containing superfamily
  JOURNAL   Biochem Soc Trans 39 (4), 977-983 (2011)
   PUBMED   21787333
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Bingle,C.D., LeClair,E.E., Havard,S., Bingle,L., Gillingham,P. and
            Craven,C.J.
  TITLE     Phylogenetic and evolutionary analysis of the PLUNC gene family
  JOURNAL   Protein Sci 13 (2), 422-430 (2004)
   PUBMED   14739326
REFERENCE   3  (bases 1 to 1771)
  AUTHORS   Andrault,J.B., Gaillard,I., Giorgi,D. and Rouquier,S.
  TITLE     Expansion of the BPI family by duplication on human chromosome 20:
            characterization of the RY gene cluster in 20q11.21 encoding
            olfactory transporters/antimicrobial-like peptides
  JOURNAL   Genomics 82 (2), 172-184 (2003)
   PUBMED   12837268
REFERENCE   4  (bases 1 to 1771)
  AUTHORS   Dear,T.N., Boehm,T., Keverne,E.B. and Rabbitts,T.H.
  TITLE     Novel genes for potential ligand-binding proteins in subregions of
            the olfactory mucosa
  JOURNAL   EMBO J 10 (10), 2813-2819 (1991)
   PUBMED   1915264
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474050.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_575268.1, XM_001063849.1.
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..1771
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /note="BPI fold containing family B, member 3"
                     /db_xref="GeneID:499924"
                     /db_xref="RGD:1565613"
     exon            1..129
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            130..255
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     CDS             141..1520
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /note="Potential ligand-binding protein RYA3; long palate,
                     lung and nasal epithelium carcinoma-associated protein 3;
                     Long palate, lung and nasal epithelium carcinoma
                     associated protein 3; antimicrobial peptide RYA3"
                     /codon_start=1
                     /product="BPI fold-containing family B member 3 precursor"
                     /protein_id="NP_001102678.1"
                     /db_xref="GeneID:499924"
                     /db_xref="RGD:1565613"
                     /translation="MMPGVYALLLLWGLATPCLGLLETVGTLARIDKDELGKAIQNSL
                     VGGPILQNVLGTVTSVNQGLLGAGGLLGGGGLLSYGGLFSLVEELSGLKIEELTLPTV
                     SIKLLPGVGVQLSLHTKLAAEVNVSSKVALGMSPRGTPILILKRCNTLLGHISLTSGL
                     LPTPIFGLVEQTLCKVLPGLLCPVVDSVLSVVNELLGATLSLVPLGPLGSVEFTLATL
                     PLISNQYIELDINPIVKSIAGDVIDFPKPRLPVKMPPKEDHTSQVTVPLYLFNTVFGL
                     LQTNGALDLDITPEMVPRNIPLTTTDLAALAPEALGKLPPGQHLLLSLRVMKSPMILL
                     QNKKVTVSIPVTIHVLSSVPQGTPVALFQMNGVMTLNAHLVPSTTKLHISLSLERLTV
                     QLASSFSQPFDASRLEEWLSDVVRAAYMQKLNEHLEVGIPLPKILNVNFANSVVDVIE
                     NAVVLTVAP"
     exon            256..412
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            413..497
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            498..616
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            617..680
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            681..741
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            742..833
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            834..1013
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..1067
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1238
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1239..1306
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1307..1349
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1350..1413
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1414..1490
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
     exon            1491..1771
                     /gene="Bpifb3"
                     /gene_synonym="Lplunc3; Rya3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccagcccct ggctctcctt gcagaaggaa ggcttaattc aggccctcgg ggaaaaccgc
       61 aatttgctcc tgacttgaca tactgacggg tttctggcgg ctgtgccccc tttgtctctc
      121 caagctgctg tgtgcagctg atgatgccgg gtgtgtacgc cctgcttctg ctctggggcc
      181 tggccacgcc gtgtctgggg ctgcttgaga cagtgggcac gcttgctcgg attgacaaag
      241 atgagctggg caaagccatc cagaactccc tagttggggg tcccattctg caaaatgtgc
      301 tggggaccgt gacatcagtg aaccagggtc tcctgggcgc aggagggctg ctcggaggtg
      361 gtggactgct gagctacggt ggcctcttta gtcttgtgga ggaactctct gggttgaaga
      421 tagaggaact aaccttgccc accgtgtcaa tcaagctgct gccgggggtt ggggtgcagc
      481 tgagcctgca caccaagctg gccgcagagg tgaatgtgtc ttcgaaagtg gcactgggca
      541 tgagccctcg ggggacaccc atccttatcc ttaagcgctg caacacgctc ttgggccaca
      601 tcagcctgac gtcagggctg ctgcccacac caatctttgg gcttgtggaa cagacactgt
      661 gcaaggtgct gcctggactg ctgtgccctg tggtagacag tgtgctgagc gtggtgaatg
      721 agctcttagg agctacgctg agcctggtac cccttgggcc tctggggtct gtggagttca
      781 ctctggccac actgccccta atctccaacc agtacattga gttggatata aatcccatcg
      841 tgaagagcat agctggtgat gtcattgatt tccccaagcc acgcctccca gtcaagatgc
      901 cccccaaaga ggaccacacc tcccaagtga ctgtcccact ctacctcttc aacactgtgt
      961 ttgggctcct gcaaaccaat ggtgcccttg acctggacat cacccctgag atggttccca
     1021 gaaatatccc gctgacaact actgacctgg cagctttggc ccctgaggcc ctggggaagc
     1081 tgccccctgg tcagcacctc ctgctctcgc tgcgggtaat gaagtcaccc atgatcctgc
     1141 tgcagaacaa gaaggtcaca gtctctatcc cagtcaccat ccacgtgctg tcttctgtcc
     1201 ctcaaggaac tcctgtagct cttttccaga tgaatggagt catgactcta aatgcccacc
     1261 tggttccatc caccaccaag ctgcacatat ctctgtcctt ggaacggttg actgtccagc
     1321 tggcctcctc cttttcccaa ccttttgacg catcccgtct agaagaatgg ctcagtgatg
     1381 tggtccgggc tgcctacatg cagaagctca atgaacacct ggaggttgga atacctctgc
     1441 ctaaaatcct caacgtcaac tttgccaatt cagtagtgga tgtcattgag aatgcggtcg
     1501 tgctcacagt ggctccatga ggcagtatga ctgcagctct tcctgttcac taagagtcct
     1561 atctgtctgc ccgctctgcc tcagtttccc tcccagcatg cattggtggc agtataagta
     1621 ctcctctccc acccaggccc accttgccct ctgttcctgt gattatgact gtttggggat
     1681 ggggttgact ggacagccac agatctgctt cagaaagcac acagcacctt ggttcaggcc
     1741 cagcctcaat aaactgaccc ttggtcttgt g
//
