LOCUS       XM_006235367            2009 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BPI fold containing family A, member 6
            (Bpifa6), mRNA.
ACCESSION   XM_006235367
VERSION     XM_006235367.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006235367.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006235367.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2009
                     /gene="Bpifa6"
                     /note="BPI fold containing family A, member 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 86% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100359775"
                     /db_xref="RGD:2323465"
     CDS             436..1608
                     /gene="Bpifa6"
                     /codon_start=1
                     /product="uncharacterized protein Bpifa6"
                     /protein_id="XP_006235429.2"
                     /db_xref="GeneID:100359775"
                     /db_xref="RGD:2323465"
                     /translation="MDYCYSIRQPLSPQVLAVNMRLLWASLFLGCLLSRSHALLEDSI
                     QKSGIKSGGGGPGLNTGLLSGNKGEYTNLGDAIGKIPAPIPVASPVKVPEINTDIAGQ
                     LDQPEMNIPGDLDTSGITGQLSTPVLNNDILAQEGLLGAVILNNQNLVTEREKLQMLL
                     LGGKVSFGIKNDLVEAAGTSAVEGLVCKGSLGGLCGHGSLSGMNNVLKTMNSGKLDSW
                     LNVTRFDIVHLSWKVFASSDLEVKFQTKLTINFSGMLSFLSGATVDVNIEIPLHLQQA
                     EPGQISFSVKSCRTVFTGIQVNTGVFSPMMESMLKWSLNISLPNILCPVVRFWFNIIN
                     QQLAILRNIASLGMPGNSNLLNASQPMLYEHTYYMDFKNKSFPASFINWLIKTPSS"
ORIGIN      
        1 agtcttctgc agctggctgg ggattttcca tgaacccagt catacttaat tctaaccata
       61 atagtaacat caataatgga gggcttcaag ggcatcgctc ccaacagggt ctgggctcag
      121 cctgcttggc tttggatttt tctctgtcac cagctgtgtg gttttgggca actcgattta
      181 catccccata cttcatttct tccctgaatt ctgttttaga aagacatcat attaattgtc
      241 atacaacaac ctcccagttt taactactta agcagaggag ctcactgtct agagggttcc
      301 ctgcctcccc aatgccagga tcttccaaaa aaaaaatatg aagtgactgt ttttacagaa
      361 ggggaaactg aggcttggct agaccacata gaggatgatt ataagttttg cataagaccc
      421 caggactcta gggtcatgga ctactgttac tccatccgcc aaccattgtc tccacaggta
      481 cttgcagtga acatgagact cttgtgggca tccctcttcc tcggctgcct gcttagcaga
      541 agccatgctt tattggaaga ttccattcag aaatcaggca tcaaaagtgg aggcggtggc
      601 ccaggattga atacaggatt gctgagtggt aataaaggtg aatacactaa tctgggagat
      661 gccattggga aaatcccagc tccgatccct gttgcttcac ctgtcaaggt ccctgagatc
      721 aatacagaca ttgcgggcca acttgatcaa cctgagatga atattccagg agacttggac
      781 acaagtggta ttactggcca attgtcaaca cctgtcctca acaacgacat cctggcccaa
      841 gaagggctgt tgggtgctgt tattctcaac aaccagaatc tagtcacaga aagagaaaaa
      901 ctacaaatgc tactcctggg tggcaaagta tcatttggta taaaaaatga cctcgtggag
      961 gcagcaggga cctcagctgt ggaaggcttg gtctgcaaag gctccctggg tggcctttgt
     1021 ggccatggga gtctctctgg catgaataat gttctgaaga ccatgaattc tgggaaactt
     1081 gatagctggc tcaatgtcac ccgcttcgac attgtccatc tatcatggaa ggtctttgcc
     1141 tcatctgatc tcgaagttaa atttcagacc aagttgacta tcaacttctc agggatgctc
     1201 tcatttctca gtggtgccac agtggatgtg aacattgaaa tccccttgca tttgcaacag
     1261 gctgagcctg gtcaaatctc attttccgtg aagagttgcc ggacagtatt cactgggatc
     1321 caagtgaata caggcgtgtt ctccccaatg atggaatcaa tgttgaaatg gtccttgaac
     1381 atctccttgc ccaacatatt gtgcccagtg gtccgattct ggttcaacat catcaaccaa
     1441 cagttggcca ttctcagaaa tatcgcctca ttagggatgc cggggaacag caacttactc
     1501 aatgcctcgc aacccatgct gtatgaacac acatattaca tggactttaa gaacaaaagc
     1561 ttcccggctt ctttcatcaa ctggttgatt aaaactccct cttcataaac acgttgagac
     1621 accctgctgg cttgaggaag acttctaaag ccaggcaact gtgtaaggaa gaggatggga
     1681 caagtggaat atgccttaat gtagccccta aagtctccga agaccaggaa ggctcaagtg
     1741 gagggcaaga cctgcagcac ccaaggatcc gccggggagg atcctgggaa cccttctacc
     1801 atgatatata ttcttccagc aggtcacact tgacaggcct ttacttatgt ggatctatca
     1861 tggtgttcta tatagcatta atgaaatgtc aagttgtgaa cagaaagtta aataaagcaa
     1921 atcccctccc ctatgtcact gctgctaaaa atatagcaga aataggctca aatgtctctc
     1981 tattcaggaa caataaaggt caccttgga
//
