LOCUS       NM_080775                827 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus BPI fold containing family A, member 2F
            (Bpifa2f), mRNA.
ACCESSION   NM_080775
VERSION     NM_080775.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Bingle CD, Seal RL and Craven CJ.
  TITLE     Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a
            subfamily of the BPI fold-containing superfamily
  JOURNAL   Biochem Soc Trans 39 (4), 977-983 (2011)
   PUBMED   21787333
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Inukai Y, Ikeda R and Aiyama S.
  TITLE     Effect of glucocorticoid on the differentiation and development of
            terminal tubules in the fetal rat submandibular gland
  JOURNAL   Cells Tissues Organs 187 (3), 233-242 (2008)
   PUBMED   17984628
  REMARK    GeneRIF: These findings suggest that CORT promote the
            differentiation of type III cells, and moreover stimulate the
            production of secretory granules reactive for SMGB and WGA by
            acting on the terminal tubules of the developing rat submandibular
            gland.
REFERENCE   3  (bases 1 to 827)
  AUTHORS   Bingle CD, LeClair EE, Havard S, Bingle L, Gillingham P and Craven
            CJ.
  TITLE     Phylogenetic and evolutionary analysis of the PLUNC gene family
  JOURNAL   Protein Sci 13 (2), 422-430 (2004)
   PUBMED   14739326
REFERENCE   4  (bases 1 to 827)
  AUTHORS   Gupta N, Asp E, Levan G and Mirels L.
  TITLE     Structure and chromosomal localization of the rat salivary Psp and
            Smgb genes
  JOURNAL   Gene 243 (1-2), 11-18 (2000)
   PUBMED   10675608
REFERENCE   5  (bases 1 to 827)
  AUTHORS   Mirels L, Miranda AJ and Ball WD.
  TITLE     Characterization of the rat salivary-gland B1-immunoreactive
            proteins
  JOURNAL   Biochem J 330 (Pt 1) (Pt 1), 437-444 (1998)
   PUBMED   9461541
REFERENCE   6  (bases 1 to 827)
  AUTHORS   Mirels L and Ball WD.
  TITLE     Neonatal rat submandibular gland protein SMG-A and parotid
            secretory protein are alternatively regulated members of a salivary
            protein multigene family
  JOURNAL   J Biol Chem 267 (4), 2679-2687 (1992)
   PUBMED   1370829
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from M83210.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: M83210.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..827
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /note="BPI fold containing family A, member 2F"
                     /db_xref="GeneID:54303"
                     /db_xref="RGD:3725"
     exon            1..9
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            10..91
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     CDS             25..645
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /note="neonatal submandibular gland protein B"
                     /codon_start=1
                     /product="BPI fold containing family A, member 2F
                     precursor"
                     /protein_id="NP_542953.1"
                     /db_xref="GeneID:54303"
                     /db_xref="RGD:3725"
                     /translation="MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIR
                     YALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLP
                     ARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLA
                     LDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST"
     exon            92..218
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            219..326
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            327..479
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            480..561
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            562..616
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            617..685
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     exon            686..827
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
                     /inference="alignment:Splign:2.1.0"
     regulatory      811..816
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bpifa2f"
                     /gene_synonym="Smgb"
ORIGIN      
        1 tccaaaccag tgtcagaatc aaagatgttc caacttggga gccttgttgt tttgtgtggc
       61 ctgctcattg ggacctcagg atcacttttt gatatctttc aaaacccaga gctggacgtg
      121 gagtcagttt ggtcagaaat caattacaga attagatacg cgttggaaac aatggatctt
      181 gacatgttag ctgactattt atctaagagg ggaatcgagt tgaaaatcaa ggacctcaga
      241 attctgaacc tgaatcatga agtgtctccc aatggtgatg aagttaccct gaagatgccc
      301 atggctctta atgcatctct gtctctgcct gcccgtgatt taactactga tgtctctatt
      361 tctatggagg caataacttc ctttgctatt gaaaaagatc ccaagactgg ccgtcgtgtc
      421 ctgaacatgc agcgatgctc acttaataca gacaatacct ccattagctt gttgaacaga
      481 aaaagtaact ttgtcaactt agctctggac tctgcattgt acctcataaa aaggggcctg
      541 acacttcccg tgagacgcca attgtgtcca gtgctccaat taatcatcag caacaccttt
      601 catcctgacg aaatctccaa tccgcagact gcaatctcca cctgaagagg aatgaacaaa
      661 ggaagatgcc atgtcgccct gataggttgc tgcacagtgg ctccatctca ttccttgtag
      721 catctccctg taggattctt ctatcatcca taccacatca gactcccttc ttctctcagt
      781 ggtctccata cttgtcacta ttaccccagc aataaaatcc taactgc
//
