LOCUS       NM_001037206            1212 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus biphenyl hydrolase like (Bphl), mRNA.
ACCESSION   NM_001037206 XM_341520
VERSION     NM_001037206.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Wright RH, Lioutas A, Le Dily F, Soronellas D, Pohl A, Bonet J,
            Nacht AS, Samino S, Font-Mateu J, Vicent GP, Wierer M, Trabado MA,
            Schelhorn C, Carolis C, Macias MJ, Yanes O, Oliva B and Beato M.
  TITLE     ADP-ribose-derived nuclear ATP synthesis by NUDIX5 is required for
            chromatin remodeling
  JOURNAL   Science 352 (6290), 1221-1225 (2016)
   PUBMED   27257257
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Rosenthal F, Feijs KL, Frugier E, Bonalli M, Forst AH, Imhof R,
            Winkler HC, Fischer D, Caflisch A, Hassa PO, Luscher B and Hottiger
            MO.
  TITLE     Macrodomain-containing proteins are new mono-ADP-ribosylhydrolases
  JOURNAL   Nat Struct Mol Biol 20 (4), 502-507 (2013)
   PUBMED   23474714
REFERENCE   3  (bases 1 to 1212)
  AUTHORS   Putt KS and Hergenrother PJ.
  TITLE     A nonradiometric, high-throughput assay for poly(ADP-ribose)
            glycohydrolase (PARG): application to inhibitor identification and
            evaluation
  JOURNAL   Anal Biochem 333 (2), 256-264 (2004)
   PUBMED   15450800
REFERENCE   4  (bases 1 to 1212)
  AUTHORS   Mootha VK, Bunkenborg J, Olsen JV, Hjerrild M, Wisniewski JR, Stahl
            E, Bolouri MS, Ray HN, Sihag S, Kamal M, Patterson N, Lander ES and
            Mann M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   5  (bases 1 to 1212)
  AUTHORS   Bernardi R, Rossi L, Poirier GG and Scovassi AI.
  TITLE     Analysis of poly(ADP-ribose) glycohydrolase activity in nuclear
            extracts from mammalian cells
  JOURNAL   Biochim Biophys Acta 1338 (1), 60-68 (1997)
   PUBMED   9074616
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC105908.1.
            
            On Nov 18, 2005 this sequence version replaced XM_341520.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC105908.1, FQ218691.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760396, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..1212
                     /gene="Bphl"
                     /note="biphenyl hydrolase like"
                     /db_xref="GeneID:361239"
                     /db_xref="RGD:1307572"
     exon            1..113
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
     CDS             7..882
                     /gene="Bphl"
                     /note="biphenyl hydrolase-like (serine hydrolase, breast
                     epithelial mucin-associated antigen); biphenyl
                     hydrolase-like (serine hydrolase)"
                     /codon_start=1
                     /product="valacyclovir hydrolase"
                     /protein_id="NP_001032283.1"
                     /db_xref="GeneID:361239"
                     /db_xref="RGD:1307572"
                     /translation="MATAAVHPVALRLRLLLSPLKSRICVPQAEHAATFGTAVTSAKA
                     AVNGIHLHYQRVGEGEHAVLLLPGMLGSGKTDFAPQLQSLNKKRFTLVAWDPRGYGES
                     RPPDRDFPRDFFERDAKDAVDLMKALQFKQVSLLGWSDGGITALIAAAKYPSYIRKMV
                     IWGANAYVTEEDSRIYQGIRDVSKWSEKARKPLEALYGHDYFAKTCEKWVDGINQFKH
                     LPDGNICRHLLPLIQCPTLIVHGEKDPLVPRFHADFLLEHVKGSRLHLMPEGKHNLHL
                     RFADEFNRLVEDFLQ"
     exon            114..217
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
     exon            218..384
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
     exon            385..538
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
     exon            539..670
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
     exon            671..794
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
     exon            795..1187
                     /gene="Bphl"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagctatgg cgaccgcagc agtccaccca gtagccctgc ggttacggtt gctcctctca
       61 cccctgaaat cccggatctg cgtaccccag gccgagcacg cagccacctt cggcactgca
      121 gtaacttctg ccaaggcggc tgtgaatggc atccacctgc attaccagcg agtgggagaa
      181 ggggagcatg cagtcctcct acttcctggg atgttgggaa gcggaaagac cgattttgca
      241 cctcagcttc agagcctaaa taagaagcgc ttcacattgg tggcctggga tcctcgagga
      301 tacggagagt ccagaccccc agatcgagat ttcccacggg acttttttga gagggatgca
      361 aaggatgctg ttgacttgat gaaggcgctg cagttcaagc aggtctccct cctgggctgg
      421 agtgatggcg gcataaccgc gctcattgct gctgcaaagt acccatctta tatccgcaag
      481 atggtgatct ggggggccaa cgcctacgtc actgaggaag acagcaggat ttaccagggt
      541 atccgagatg tttctaaatg gagtgagaag gcaaggaaac ccctggaagc cctatatgga
      601 catgactact ttgccaaaac ctgtgagaag tgggtggacg gcataaacca gtttaaacat
      661 ctgccagatg gtaacatctg ccggcacttg ctgcccctga tccagtgccc taccctcatt
      721 gtgcacgggg agaaggaccc attggtccca cgctttcatg ctgacttcct tctagagcat
      781 gtgaaagggt cacggttgca cctgatgcca gagggcaagc ataacctaca cttgcgcttt
      841 gcggatgaat tcaacaggtt ggtagaagac tttctacagt gagagcagga aacctctggt
      901 gtctaggaga ttctgtattg aaggaccatg tcattgcctg ttacctggat gctcgcaaac
      961 accttccctc gcttttcacc tcagttcaca gacaggccta ccaggcttac tgccttccct
     1021 gcaatgggac tctacacaag ccgggaaaat agcaaaccca aatcaggttg tagcttcaat
     1081 agctgcaaaa aacatgaaca ttagcatttt taacactaac tttctatcat tgtcttcaaa
     1141 gtaaattctt accatgattt gttttcaaat aaattttatg gaaaacaaaa aaaaaaaaaa
     1201 aaaaaaaaaa aa
//
