LOCUS       XM_039107293            1660 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus bisphosphoglycerate mutase (Bpgm),
            transcript variant X1, mRNA.
ACCESSION   XM_039107293
VERSION     XM_039107293.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039107293.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1660
                     /gene="Bpgm"
                     /gene_synonym="Ab2-098"
                     /note="bisphosphoglycerate mutase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 72 ESTs, 19 long SRA reads, 10 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 45 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:296973"
                     /db_xref="RGD:735018"
     CDS             212..988
                     /gene="Bpgm"
                     /gene_synonym="Ab2-098"
                     /codon_start=1
                     /product="bisphosphoglycerate mutase isoform X1"
                     /protein_id="XP_038963221.1"
                     /db_xref="GeneID:296973"
                     /db_xref="RGD:735018"
                     /translation="MSKHRLIILRHGEGQWNKENRFCSWVDQKLNSDGLEEARNCGRQ
                     LKALNFEFDLVFTSILNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREK
                     MALNHGEEQVRLWRRSYNVTPPPIEESHPFFHEIYNDRRYKVCDVPLDQLPRSESLKD
                     VLERLLPYWKERISPEILKGKTVLISAHGNSSRALLKHLEGISDEDIINITLPTGVPI
                     LLELDENLRAIRPHQFLGNQEAIQAAIKKVDDQGKVRQNK"
ORIGIN      
        1 cgtcgaccgg cttttcaagc gccatcggtc ctgctcggtc tggcttctgg gctacaaaag
       61 atcgtcgatg ccggcggtag cgatgaatcc tccctggcac ctgcagcacg gcgtcgctga
      121 ggactgggtg ctactggtgg tttccttgca gctgtactgc tgttctcgaa cctcacccaa
      181 ttgagaactc cagggcagcc cagccaccag catgtcgaag cacagactta ttatactaag
      241 acacggagag ggccaatgga ataaggagaa ccgattctgt agttgggtgg accagaaact
      301 taacagtgac ggactggagg aggctcggaa ctgtgggagg cagctcaaag ctctcaactt
      361 cgagtttgat ctcgtcttca cgtccatcct taacaggtcc attcacacag cctggctgat
      421 cctggaagag ctggggcagg agtgggttcc tgtggagagc tcttggcgtc tgaatgagcg
      481 tcactatgga gccttgattg gtctcaacag ggagaaaatg gctttgaatc atggtgaaga
      541 gcaggtaagg ctctggagga gaagctacaa cgtgacccca cctcccattg aggagtctca
      601 tcccttcttc catgagatct acaatgaccg gaggtacaaa gtgtgcgacg tgcccttgga
      661 tcaactgcca cgttcagaaa gcttgaagga tgttctggaa agacttcttc cctactggaa
      721 ggaaaggatt tctccggaaa tcttgaaggg caaaaccgtt ctgatatctg ctcatgggaa
      781 tagcagtaga gccctcctga aacatctaga aggtatctca gacgaggata tcatcaacat
      841 cactctgccc actggagttc cgattctgct ggagttggat gagaacctgc gtgccattag
      901 gcctcaccag ttcttgggca accaggaggc catccaggca gccattaaga aagtggatga
      961 tcaagggaaa gtgagacaaa acaaataata aagtatgacc aggagcaagc agagtgcggg
     1021 gtggtgtgta gtgtgttccc ctgtgggctt ctcccctcct cccactggct cacttcctcc
     1081 acggctgagt ggtagagttt gtgtagataa ctaggtagtt gtcatggccc agacgtgacc
     1141 tttggatgtc taagtctaac ttaacttctg ctcctcccgt ttgatttaac attgcaaagt
     1201 agtagccagc agggtttgac caaggttgtt ttttgtttta gagacaggag agtaacagga
     1261 tgaaattgtt tatcacttaa caagtcatca ctgagtcccc actggcagtc actgttccaa
     1321 tgagcaggtc actgttttat tccacaatag ttcctgagaa gagtgaacac tactaggtag
     1381 cacttgggca gtttacacca gaggcccatc gaatggcaga gtcatggatg ggcccttgag
     1441 aaggcatccg agaaccacag tagtacaagg ccctttgatt tcccccagcc cactgccatc
     1501 ctgtttgccg tcagtaaaat caacttcagc cagtgagaag gaccgggatt ggcacagccg
     1561 tagccgttta tgttcttctg tttctctttg agcttttgaa ctttaacctt tggggactta
     1621 gcagttagat gaaaataaag ctttgtgact acaaacagca
//
