LOCUS       XM_039099253            3131 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus BCL2 interacting protein 5 (Bnip5),
            mRNA.
ACCESSION   XM_039099253
VERSION     XM_039099253.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099253.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3131
                     /gene="Bnip5"
                     /note="BCL2 interacting protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 97% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:689561"
                     /db_xref="RGD:1591066"
     CDS             1..2022
                     /gene="Bnip5"
                     /codon_start=1
                     /product="protein BNIP5"
                     /protein_id="XP_038955181.1"
                     /db_xref="GeneID:689561"
                     /db_xref="RGD:1591066"
                     /translation="MPTSRNPRLGVSRDSSDSCSLSPTETPRGPRKPSGNKRARSLDR
                     QVLRKDPESSNSRHLSSTTCRRTASDRARGSESPSHFAEAQGPAAAATARPLGEGNKF
                     LPSEQGPPEDTKKERPPREAQHSWLRAVFDLLLMRLEEPREKASKMSKGKGNLPEAAE
                     EPALKKKSQEKRAVRKKYSHRKPIAEEPPEPQTAEAKGQEDIPPSVAASLATEETDLG
                     LICRGGPESDLPQALPAEGGHAETPGSSGQAAGPPPEEDPRKPDQDDVIWQIVELLKK
                     AGDLLEEEQVPQPEVIPPQKPTPPPRKKSLEKKSSLKRALSLKKTTSEEPKRVGLATI
                     LGPETRPKRPSFLPLCVSGPRTSTSRSYDSEAPTVHEVRSVRGGGSHPSELHPPPAVF
                     QGPEEKPLLDRASESREFRRKILALLQSAEEEQQQVQVKEAEEAGEHPAPAGKVKSQA
                     KKSNLRRAFSLRKHGSKESKRTEASGTPGSGNLEARPPKRHGFLPMCVGGHRASIPSS
                     PESLEFQKAEAAGGGPAGSPEVPFQARSHIPDEGPPPEGAWESKELIIQKLVASLQEV
                     DRELGRQIRKYPSFRRFFNEFSDASLRKLVATLDRQKALLAEEDRSLGNRPPPPCAFG
                     ALNKFATNHSCAICTLMQSRGQYRGHSYAHFLSRKAQQDIMSLDGQSPD"
ORIGIN      
        1 atgcccacct ccaggaaccc ccgcttaggg gtgtcccggg acagcagcga ctcctgtagt
       61 ctgagcccaa cggagacccc gaggggccca aggaagcctt caggaaataa gagagcccga
      121 tccttggacc ggcaggttct caggaaggac cctgagtcct cgaactccag gcacctctcc
      181 agcaccacct gcaggaggac agccagcgat cgagcccgag gttctgagag cccatctcac
      241 tttgcagagg cccagggccc tgccgccgct gccacagccc gccctctggg agaggggaac
      301 aaatttctcc ccagtgagca ggggccccca gaagacacca agaaagagag gcctccgagg
      361 gaggcccagc acagctggtt gagggcggtg tttgatctct tactcatgag gctagaggag
      421 cccagagaaa aagccagcaa gatgtcaaag gggaaaggga acctaccaga ggcagctgag
      481 gagccagccc ttaaaaagaa atcccaggag aagagggccg tccgcaagaa atacagtcac
      541 aggaagccca ttgctgaaga gcctcctgag ccccagaccg cagaagcaaa aggccaagag
      601 gacataccac ccagtgtagc tgcctcactc gccactgagg agacagactt ggggctgatc
      661 tgcagggggg gaccagagtc tgacctccct caggccttgc ccgccgaagg aggccatgct
      721 gaaaccccag gtagctctgg tcaagccgca ggtcctccac cagaagagga ccccaggaag
      781 cctgaccagg atgacgtcat ctggcagatc gtggaattgc tcaagaaagc tggagacctt
      841 ctggaagaag agcaagtccc tcagccggaa gtcattcctc cacaaaaacc aacgccaccc
      901 cccaggaaga aatccctgga gaagaagtct agcctgaaga gagccttgtc cctcaagaag
      961 actacctccg aggaacccaa gagagtgggc ttagccacta tccttggccc agaaacccgg
     1021 cccaagaggc ccagcttcct acccctgtgt gttagtggtc cccgaacttc cacctccagg
     1081 agctacgact cagaggcgcc cacggtccat gaagttcggt ctgtacgtgg tggaggctcc
     1141 catccctctg agctccaccc gccacctgct gtatttcagg gacccgagga gaagccactg
     1201 ctggacagag cctcggaatc cagagaattc aggcggaaga tcctggccct actccagagc
     1261 gcagaggaag agcagcagca agttcaagtg aaggaggcag aggaggccgg agagcacccc
     1321 gccccagccg gcaaggtgaa gtcacaggcg aagaagtcta acctccggag agccttttct
     1381 cttaggaaac acggctccaa ggagtctaag agaacggagg cttcagggac tccaggctcc
     1441 ggcaacctgg aggcgcggcc acccaagagg cacggcttcc tgcccatgtg tgtcggtggc
     1501 cacagagctt ccatccccag cagtccagaa agcctggagt tccagaaggc ggaggctgca
     1561 ggagggggac cagctggctc cccagaagtg ccgttccagg ctagaagcca cataccagat
     1621 gaggggcctc caccagaggg agcctgggaa tctaaggagc ttatcatcca aaagctggtg
     1681 gccagtctcc aggaggtgga cagggaacta gggaggcaga tccggaagta ccccagcttc
     1741 aggcgttttt ttaatgagtt ctcagatgcc tccctcagga agctggtggc caccttagac
     1801 agacagaagg ccctcctcgc agaggaagac aggagcctcg gcaacaggcc gccaccacct
     1861 tgtgccttcg gagcactgaa caagtttgcc accaaccaca gctgcgccat ctgcactcta
     1921 atgcagtcca gaggccaata caggggacac agttacgccc acttcctgtc caggaaggcc
     1981 cagcaggaca tcatgagtct ggatggccag agtccagact gaaggccaca tcccatacac
     2041 aagttctttc ggaatagctg agggtcagca gctgtggtgg gcagagcttg aaaaccctgc
     2101 agggtggccc tcttttgtgc ttcccagacc aacgtccctg caggcaaaaa cagacaatgg
     2161 acagtcctgt gtgagctcag cactgtctga ggacaccact ttcttcctgg atgctggacc
     2221 cagaggctgt gctggggtca acactggaat ggggttagga ggtcaggctc cgtggagtga
     2281 acctgaggag aagctctccc ctctgcagtc tctacatccc aaccccctac ccccactccc
     2341 tcatcacccc cccatgaaat gacacctgct ggatccatga gtcttagtgt gtgtgcatgt
     2401 ctgtctgtct gtctgtctct gtgtgtcttt gtggggaggg aaggagtgta ggtcagaggt
     2461 catccccagt tcctctccag tgctgacgac atcacaaacc tctgccaccc caccccaccg
     2521 tacttgagtc tttgttttga aaaatagttt tgtttttttt ttaaaaattc attttctaac
     2581 tgcaaaatgc atttttactc aaacagctgg gtctctgcca agtcactcac ccagttggtc
     2641 aggtaatgct cagggatcca tgagagaccc ctgggaactc tgtagacccc agcaggagcc
     2701 tgggctaacc tatagctcag aggggtgact cctgatctcc cagaatcctg ttaaccttta
     2761 tgaagattcc ggttatctag tgcgtgttta caattatctc cccctgtggc ccagacaaga
     2821 ccagcatctc tcaatcccat cccaggctct caagtactga ggctacagtt gtgggccacc
     2881 acacctgggc tactttatca tggtcacagc ttttcagaaa gtcgaagagg gcttcaagcc
     2941 ggactgcccc agacggccgc aaagatgtgg actgacagcc tcttgcccta agacatgcca
     3001 tctccatcct ttctgtcctg gctggttttg tgccaacgtg acacgagctg gaattatcac
     3061 agagaaagga gcctccgttg tggaaaggtc tccatgagac ccagctgtaa ggcattttct
     3121 caattagtga t
//
