LOCUS       NM_080897               1106 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus BCL2 interacting protein 1 (Bnip1), mRNA.
ACCESSION   NM_080897
VERSION     NM_080897.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Wang,P., Wu,Y., Li,Y., Zheng,J. and Tang,J.
  TITLE     A novel RING finger E3 ligase RNF186 regulate ER stress-mediated
            apoptosis through interaction with BNip1
  JOURNAL   Cell Signal 25 (11), 2320-2333 (2013)
   PUBMED   23896122
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Cho,B., Choi,S.Y., Park,O.H., Sun,W. and Geum,D.
  TITLE     Differential expression of BNIP family members of BH3-only proteins
            during the development and after axotomy in the rat
  JOURNAL   Mol Cells 33 (6), 605-610 (2012)
   PUBMED   22639046
REFERENCE   3  (bases 1 to 1106)
  AUTHORS   Tang,F., Wang,B., Li,N., Wu,Y., Jia,J., Suo,T., Chen,Q., Liu,Y.J.
            and Tang,J.
  TITLE     RNF185, a novel mitochondrial ubiquitin E3 ligase, regulates
            autophagy through interaction with BNIP1
  JOURNAL   PLoS One 6 (9), e24367 (2011)
   PUBMED   21931693
REFERENCE   4  (bases 1 to 1106)
  AUTHORS   Lomonosova,E. and Chinnadurai,G.
  TITLE     BH3-only proteins in apoptosis and beyond: an overview
  JOURNAL   Oncogene 27 Suppl 1 (Suppl 1), S2-S19 (2008)
   PUBMED   19641503
  REMARK    Review article
REFERENCE   5  (bases 1 to 1106)
  AUTHORS   Verrier,S.E., Willmann,M., Wenzel,D., Winter,U., von Mollard,G.F.
            and Soling,H.D.
  TITLE     Members of a mammalian SNARE complex interact in the endoplasmic
            reticulum in vivo and are found in COPI vesicles
  JOURNAL   Eur J Cell Biol 87 (11), 863-878 (2008)
   PUBMED   18834646
REFERENCE   6  (bases 1 to 1106)
  AUTHORS   Chung,I.H., Lee,S.H., Lee,K.W., Park,S.H., Cha,K.Y., Kim,N.S.,
            Yoo,H.S., Kim,Y.S. and Lee,S.
  TITLE     Gene expression analysis of cultured amniotic fluid cell with Down
            syndrome by DNA microarray
  JOURNAL   J Korean Med Sci 20 (1), 82-87 (2005)
   PUBMED   15716609
REFERENCE   7  (bases 1 to 1106)
  AUTHORS   Nakajima,K., Hirose,H., Taniguchi,M., Kurashina,H., Arasaki,K.,
            Nagahama,M., Tani,K., Yamamoto,A. and Tagaya,M.
  TITLE     Involvement of BNIP1 in apoptosis and endoplasmic reticulum
            membrane fusion
  JOURNAL   EMBO J 23 (16), 3216-3226 (2004)
   PUBMED   15272311
REFERENCE   8  (bases 1 to 1106)
  AUTHORS   Heon,S., Bernier,M., Servant,N., Dostanic,S., Wang,C., Kirby,G.M.,
            Alpert,L. and Chalifour,L.E.
  TITLE     Dexrazoxane does not protect against doxorubicin-induced damage in
            young rats
  JOURNAL   Am J Physiol Heart Circ Physiol 285 (2), H499-H506 (2003)
   PUBMED   12714334
REFERENCE   9  (bases 1 to 1106)
  AUTHORS   Boyd,J.M., Malstrom,S., Subramanian,T., Venkatesh,L.K.,
            Schaeper,U., Elangovan,B., D'Sa-Eipper,C. and Chinnadurai,G.
  TITLE     Adenovirus E1B 19 kDa and Bcl-2 proteins interact with a common set
            of cellular proteins
  JOURNAL   Cell 79 (2), 341-351 (1994)
   PUBMED   7954800
  REMARK    Erratum:[Cell. 1994 Dec 16;79(6):1121.. PMID: 8001138]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF454391.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF454391.1, FQ218385.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..1106
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /note="BCL2 interacting protein 1"
                     /db_xref="GeneID:140932"
                     /db_xref="RGD:620799"
     exon            1..95
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             12..698
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /note="BCL2/adenovirus E1B 19kDa-interacting protein 1;
                     BCL2/adenovirus E1B interacting protein 1-like 1"
                     /codon_start=1
                     /product="vesicle transport protein SEC20"
                     /protein_id="NP_543173.1"
                     /db_xref="GeneID:140932"
                     /db_xref="RGD:620799"
                     /translation="MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSELTELN
                     TKVKEKFQQLKHRIQELEQSAKEQDKESEKQLLLQEVENHKKQMLSNQTSWRKANLTC
                     KLAIDNLEKAELLQGGDSLRQRKTTKESLAQTSSTITESLMGISRMMSQQVQQSEEAM
                     QTLVSSSRTLLDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLY
                     IVKKRLFPFL"
     exon            96..188
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            189..280
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            281..382
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            383..501
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            502..1106
                     /gene="Bnip1"
                     /gene_synonym="Bnip1l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgtttccaa catggcggcc ccccaggatg tccacgtccg aatctgtaac caggagattg
       61 tcaaattcga cctggaggtg aaggcactta tccaggatat tcgagattgt tccggaccct
      121 taagtgagct taccgaactg aacactaagg tgaaagaaaa gtttcaacag ttaaaacaca
      181 ggatccagga gctcgagcag tcagcaaagg agcaagacaa ggagtcggag aagcagcttc
      241 tacttcagga agtggagaac cacaaaaagc agatgctcag caaccagacc tcatggcgga
      301 aagccaatct tacctgcaag cttgccatcg acaacctgga gaaagcagaa cttctgcaag
      361 gaggagactc cttaaggcag aggaaaacta ccaaagaaag tttggcccag acatccagca
      421 ccatcacaga gagtctcatg gggatcagca ggatgatgtc acagcaggtg cagcagagtg
      481 aggaggctat gcagactcta gtcagctctt cacggactct cctggatgca aacgaagagt
      541 ttaagtccat gtcaggaacc attcagttgg gccggaagct catcacaaaa tacaaccgcc
      601 gggaactaac ggacaagctt ctcatcttcc tcgccctggc cctgttcctt gccacggtcc
      661 tctatattgt gaaaaagcgc ctcttcccat ttttgtaagg gagagctgcc ggctttggcc
      721 cgtgcattcc agcgtcagga cccggggctc tcaaggactg gccgggctgc caaactggcc
      781 ttcccatctg cctcgggtgc tcagtgaatc aagagaggga aacacagcag cccagtttcc
      841 tgccaggggg cttggaaagg gtgagtagaa tagaggagac cggaaccttc tggaccaggg
      901 cgctccacac tcacccagct tccaagcact gcggctgcca catagaacac gtcaactccc
      961 ggacttactg cacctttcgc catgtccaga ggcatgaatg gtgaatgctg ggtgtggtgg
     1021 agggaggagt ggtgaggccc gtgggagggg aggtgacgac agcccatggc tgttccctga
     1081 ataaacctca tttatttaat agagtg
//
