LOCUS       XM_008762079            4526 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Bcl2 modifying factor (Bmf),
            transcript variant X1, mRNA.
ACCESSION   XM_008762079
VERSION     XM_008762079.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762079.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762079.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4526
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4526
                     /gene="Bmf"
                     /note="Bcl2 modifying factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 62 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:246142"
                     /db_xref="RGD:628658"
     CDS             39..914
                     /gene="Bmf"
                     /codon_start=1
                     /product="bcl-2-modifying factor isoform X1"
                     /protein_id="XP_008760301.1"
                     /db_xref="GeneID:246142"
                     /db_xref="RGD:628658"
                     /translation="MPGAGVFWKQYRAVRGGLLPRQLTPTAVAARARATTSHRSPLEF
                     VPFFPIECGRQVPRVFVTLDPGAEPWHHDSEAETLSWSHPGDMEPPQCVEELEDDVFQ
                     PEDGEPGTQPGSLLSADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPVSQEDKATQTLS
                     PASPSQGVMLPCGVTEEPQRLFYAPAEPRPSMAAGLPLPSKPGLEQTRKQGRGGSLVR
                     LGCSCRIDRPECSLEQTFWEDRYCLVKFCHSEFSFHVYILHTPVGSFFPVQNVSWGWG
                     PLSNTVEGEAAVSAG"
ORIGIN      
        1 acgcaaagaa gggcggggcc tcatcagctg tttgcgggat gcccggagcg ggcgtatttt
       61 ggaaacaata ccgcgcggtg cgcggtggcc tcctcccgcg ccagctcacg cccacagcag
      121 tcgctgcccg agcccgcgcc accacctccc accgcagccc gctggagttt gtccccttct
      181 tcccaatcga gtgtgggcgc caagtccccc gagtgttcgt caccctggac cctggcgcag
      241 agccctggca tcacgactcg gaggctgaga cgctgtcctg gagtcaccca ggagacatgg
      301 agccacctca gtgtgtggag gaactagaag atgatgtgtt ccagccagag gatggggagc
      361 cagggacaca gcctgggagc ttgctctctg ctgacctgtt tgcccagagc cagctggatt
      421 gtcccctcag tcggcttcag ctcttcccgc ttacccactg ctgtggtcct gggctccggc
      481 ctgtaagcca ggaagacaag gccacccaga ccctcagccc agcctcccca agccagggtg
      541 tcatgctgcc ttgtggggtg acagaggaac cccagagact cttttacgca ccagcagaac
      601 cgagaccgag catggcggca ggtcttcctc ttccttcaaa acctggcctt gaacagacga
      661 gaaaacaggg aaggggtggg tccctggtga gactgggctg ctcttgtcgg atagatcgcc
      721 cggaatgcag tctggaacag acattctggg aggacagata ctgtcttgtc aagttttgtc
      781 attctgaatt ttctttccat gtgtacatat tacatacccc agtgggatct tttttccccg
      841 ttcagaacgt ctcctgggga tgggggcctt tgtcaaacac tgttgaagga gaggcagctg
      901 tgtctgctgg ttgagttcct aaggctctga agatgaccaa ctggcgatgt tctccaggaa
      961 gtgaactgag gcttgctact ggagctggtt aagtcaggtg aggctcccag taccatcaga
     1021 cgtgccagcc ttgcctcgtg cgtgcctgac ggaatcatgg ctttaaccca ccaggatctt
     1081 gcctgggagc tttctggcta agaacagctg tgcctcggct agctagcttt acatctgggt
     1141 tcccacttgg cacagccagt gcccaccgca tgggctcagg gattcttact cagtcgctgt
     1201 caacctccag aagacctcag ggagggttgg acttcaccaa gaacccctca aaggtgccac
     1261 aaaaatgaat caagcttgat aggcttcaag tctgactcgg tcctacatgg agacccttgg
     1321 attggtccca agggtgcaaa ctgctgccac ctttgctgcc tgggtgtcaa ccacgtggga
     1381 gccaagtagt cagttaccac catgctgttg taccagcggc ccgtgacttt gtcagctttg
     1441 ttttcaaaga ctctgccaat gactggactg gattggactg cgtccagatc agcagcagcg
     1501 ctccaagatg cggtgggctt gctgggggcg tgggagccaa gcagccatcc cactgataaa
     1561 ccggtcccag gggaatccta gacctcttgg tttccttgga aacgtgtacc tcctccccct
     1621 caccccaatt ccttttctgt acctagtggg atacgggaag aagcgaggac agtggctttg
     1681 tcagctggaa agcgactttg gaaggagcag acgtgactat gggacctgcc gactcgagag
     1741 ctgacacatc tcgaatcttc ttccttcagc tttcagctag gccagaaggg agagttctag
     1801 aaggatctca gctgcctccg accttcttcc ttctctccct gacgcagcgc tcagggaggc
     1861 aacgataagc agctgatctt agaaatcaag tcctaacttt tatgtatgta aggaaagaca
     1921 ttggtgctaa aatgaagggg agccaaggct caaataaaag atggcttccc tgagcaaaga
     1981 agaccacggg gtcactcaag gaacttggag gagaaactca gagtagactc tcgaattgaa
     2041 caagcccagt gactccagtt tctgcagagg agggtggggg cttcagtacc atagaagggc
     2101 acctggtctc ctgggcgtac acttgggcag gtttctcatg gcacaaggct gcctacagag
     2161 ggggctcata gaggctgaag tccagcctgt gctctgctct ctaggctgca catcctgatg
     2221 tgggctgggt ctgcccagag ttagggatgg cttcctgatt tgcacagagg tactgtgtgc
     2281 tctcggtggt cccgaggagg aacttaaagc atgcgtacaa gcctttgtgc ttttctgctc
     2341 agatgacctg gagatattac ctcttcttgg ccacagtcat tttctcaggg tgtataccat
     2401 ggttcgtctg ctaagaaact gggttcctgt ttgcaaggag aggggatcca agaaatgaat
     2461 atgaagactg gttccgaggc acactaatta ttgtgaagcc cagccttcct acatcccact
     2521 ccctctgccg tttagatgtg tgtgggacat atgtggtctg cccctttcct ggatcaaggc
     2581 taggacaggc aggcaggcag gcaggcaggc ttctggtatg ttcttggtgg tacatgtgtg
     2641 cccctcccca tacagaacct tgtacatcag tcacctttaa cctgatttag tagactttcc
     2701 atctgagcta aggcttagct gtcagcttca gcaaccttgc caggtacagg ctgggtaccc
     2761 tgtggcctga gaactgagcc cagagtttga cctgaacatt gagcctggga ccaggcagaa
     2821 gctggtcaga atgcactgtc ttcactttgg gccgaactag gaccaacctc actaacttgg
     2881 gcaagccagg gtgaaactta aaccctcttt tatcttccac caacctgaat ccaggctgga
     2941 gttgaagctc agagataaag ggcttgcctg tcagtcaaga gacccttgga tagatcccag
     3001 gactggaaaa tataaataaa taaaaatatg ctccctcccc ccaccccacc ccaccacccc
     3061 tagatctagg aggcagctgg aagcccagct caaggaggca agaggttccc cctggctggt
     3121 tgctctaatt ggccagtgat ctctgcctgt tgaattggct ttagagtctc ccaggacagc
     3181 ccctcccctt tgcctctccc caactccagg agcctggctg tctctagtga agagtggaga
     3241 ttcagattca gagggaggga aggtctgacc tgtgtggtga cctgtaacca gctgaaggca
     3301 gcagggcttt tgtggtgtgc tgaggatggg ggtgggagag gggctgggaa actcagtgtc
     3361 gaaatagcct agaggaacag aagccccata ttcaggggct gaactgatct cctaattcac
     3421 aatccccagg ggcatttcta aaagccagtg aacagatctg gaggggaacg tccccccagt
     3481 ccagtcactg actcccccgg ggaggctggg gtggtacaca ggagggtggg gggtgggcac
     3541 tgtgcctggc cctgtctctc tgtttcaaag tttggctgtg ctgttcagtt gtccccagtg
     3601 gccttgtctt gcttaatcag aggtggaaaa agatcacctc ccggtgacct ccttcaggcc
     3661 ccaggggatg ggctgtgtcc agagctgtgt ggcagagctt gtctccaggg tccagagagg
     3721 cccagctggc ctgccttgct gccccagcca cgaaacccaa gcccaacctc aagcatggca
     3781 gggagtgggt gttggggaca gtctagccaa ggcctctgtc tgccccaagc tttccaggaa
     3841 ctaagtagtg aagtcactgt gaccgtcctg gtcagtgagg agaatattct ggtgagagct
     3901 tccgtttctg ggaacttgag agggagtggg tacgggtgca tggagtagca aaagacccca
     3961 gccttcgtgg ctctgcagga tgtgggggaa tcagtactgt ggccaccatt cccccagtgg
     4021 agcaaactgg ctctgtgaat ataagacttg tggaggcagg ctatcctggc ctcataccct
     4081 ggctggaccc agagggacac agggtggagc cacaggcatt taaactttct ctggctccct
     4141 gtgggctgca ggcctagggg acagagcctc acgggaacag cagaacaaag ctggtctctt
     4201 ccataagtgc ccagctttgg ccaaggtgct atgagatacg tggcccccag cttgcactgc
     4261 ccctctctct acagctgtct gtctctaccc cttctctggg tccacagcaa gtgacatggg
     4321 gagacccagt gagatgtagc atttcctcca tccccagttc agttggcatg gggtctgggc
     4381 atttctgcct taaggaaagg aatggggact gttatgtttt aacctgtata taatatttga
     4441 ctgttttggt tctttatttg tatacatgtg taaataccct ctcacccatc aagtggtacc
     4501 gtttttaata aaaccattta aatcag
//
