LOCUS       XM_002728921            8473 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus bridge-like lipid transfer protein
            family member 3A (Bltp3a), transcript variant X3, mRNA.
ACCESSION   XM_002728921
VERSION     XM_002728921.6
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086038) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jul 22, 2024 this sequence was replaced by
            NM_001431780.1.
            
            On Jan 21, 2021 this sequence version replaced XM_002728921.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8473
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..8473
                     /gene="Bltp3a"
                     /note="bridge-like lipid transfer protein family member
                     3A; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 ESTs, 128 long SRA reads, 2 Proteins"
                     /db_xref="GeneID:309637"
                     /db_xref="RGD:1307264"
     CDS             314..4660
                     /gene="Bltp3a"
                     /codon_start=1
                     /product="bridge-like lipid transfer protein family member
                     3A isoform X2"
                     /protein_id="XP_002728967.3"
                     /db_xref="GeneID:309637"
                     /db_xref="RGD:1307264"
                     /translation="MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTHLELDEE
                     VLQNVLELPTWLAITRVYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNG
                     QSPIALASGQSEYGFAEKVVEGMFIVVNSITIKIHSKAFHASFELWQLQGYSVNPSWQ
                     QSDLRLTRITDPRRGEVLTFKEITWQTLRVEADATENGDQDPVTTPLRLITNQGRIQI
                     ALKRRTKDCNVVASKLTFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAQQRKSLAP
                     EPVQITPPAPSAQQTWAQAFGGSQGNSSSSRLSQYFEKFDVKESSYHLLISRLDLHIC
                     DDSQSREPGVSANRLTGGAMQLTFRKMAFDYYPFHRAGDSCKHWVRHCEAMETRSHWA
                     QQLVTEFQSRMEKWCEESSVKPPWHLGVDPPFRKKADSFSSPGKSPLDKSPTQGRQAA
                     FGSPAWSRLRSSCLVVRVDDLDIHQVSTAGQPSKKPSTLLSCSRKRHRLPSQVAAIHV
                     QFTEYYFPDNQELPVPCPNLYIQLNGLTLTVDPVSLLWGNLFCLDLYRSLEQFKAIYK
                     LEDPRGKDEHLDIRLDAFWLKVSFPLETRDLAKLHRPQALVLSTSGVIATNTRHAPHC
                     SCPDLQGLFRGFAATEFFRSSYGHFPKVPGGFSLLHMVFLHHAFQTDSLPAQPSSLPP
                     QRPAAAQDLWSLHFTQISLDFEGTENVKGHALNFVAPFPLSIWACLPLRWQQAQARRL
                     LLASEGRLKPSASFGSPVHSEALAPESVSHQRSKTERDLKSLSGSGEVLGAVREGDAG
                     VDHRGQVAELEDVADIHMLVHSTAHVRVRLDHYQYLALLRLMEVLQGLQEQLTKDTEA
                     MTGSPLQDQTVCVGVLFPSAEVALLMPPDPGAAHADSAGSDTTSLIDSELSPSEDREP
                     KSDASSDQGPVSPEKVLRDSSAENLDASQERLHGDGELQDVGPLAQQPAGKSHEAVES
                     LQAKKLSRAQTATSPPTADRDAALNGQGEPIPLRSIEGELSSAIHMTKDATKEALHAT
                     VDLTKEAVSLTRDAFSLGRDRMTSTMHKMLSLPPAKEAMAKSDEGVAAPASGGPARLR
                     FFSMKRTVSQQSFDGVSLDSGGPEDRISVDSDGSDSFVMLLESESGPESVPPGSVTSV
                     LDDSGIQGSPVMDSSGQGLPETNSSASASGDLALHSVSVLVLKVSEVSLGLEVRGEDL
                     AVALQAQQLALQQLGTVGLWQFLHGQCPGPSFEGPSDLKTDSTRPAVGLRFEVGPGAA
                     VHSPLAAQNGFLRFSLRGCDLELFTSVLNGLGPFLEDECVPVVVPMQMELLDCSVTLK
                     DDIPPIYPTSPGPVPITLTMERLMLKRGDDGVFHLGAPAQDRPLAEGPEKQQLPKEQV
                     PLVPTGQGLGHQAQGDATVFSSGELFLLQEKGSPTLQQELADTKQALAIANQDREKLL
                     QEIRKYNPLFEL"
     polyA_site      8473
                     /gene="Bltp3a"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgccccgccc ctcatcccgt gcgcctgtgc cgcggcgcgc gtccccgccc ctcgccgtgc
       61 gctctcgcca cggggagccg agagggcggc gtgcggtcgc ggttcttcgc gggaggctgc
      121 gggctgcgcg ggtgggtggg aacgtggtgg aactccgggc gctgcggcag gggcgacaga
      181 gcgccatggc ggctgctgtg gctacggcgg tcggtgcccg caccgcggcg aggtgagagg
      241 acgcctcttt accacaactg aggaggccag gacaacccgc ctgcctgcac tccacgcggg
      301 ccgcggctac agcatggccg ggatcattaa gaagcagatc ttgaagcatc tgtcccggtt
      361 cacgaagaat ctttccccag acaaaatcaa cttgagcacg ctgaaagggg agggtcagct
      421 gacccatctg gagctggatg aagaggttct gcagaatgtg ctggaactgc ctacctggct
      481 ggccatcacc agggtctact gcaacagggc ctccatccgg atccagtgga ccaagctgaa
      541 gacacatccg atctgcttgt gtctggataa ggtggaggtg gagatgaaaa cctgtgagga
      601 ccctcgaccc cccaatggac agtctcccat cgcccttgct tcaggacaga gtgagtacgg
      661 ctttgctgag aaggtggtgg aggggatgtt catcgtggtc aactccatca ccatcaagat
      721 ccactccaag gccttccacg cttcctttga actgtggcag ctccagggtt atagtgtcaa
      781 ccccagctgg cagcagagtg acctgcgtct gacccgcatc actgatcccc gccgaggaga
      841 ggttttaaca tttaaggaaa taacttggca gacgctccga gtcgaggcag acgccacaga
      901 aaacggtgat caggacccag ttaccacccc gctgaggctc attaccaacc aaggccggat
      961 ccagatagcc ctcaagagaa gaacgaagga ctgcaacgtg gttgcctcca agttgacatt
     1021 cctcctggac gacctgctct gggtgctgac agactcacag ctcaaggcga tgatgaagta
     1081 tgctgagtcg ctaagcgagg ccatggagaa gtcggcccag cagagaaaga gcctggcacc
     1141 cgagcctgtg cagatcactc cacctgctcc cagcgcccag cagacctggg cccaggcgtt
     1201 cgggggcagc caggggaaca gcagcagcag tcgcctcagc cagtattttg agaaatttga
     1261 tgtgaaggag tcctcgtacc acctcctcat ctcccgcctg gacctgcaca tctgtgacga
     1321 cagccagtcc cgagagccag gtgtgtcagc aaacagactc acaggaggtg caatgcagct
     1381 caccttccgc aagatggcgt tcgactacta ccccttccac cgggcaggtg acagctgtaa
     1441 acactgggtg cggcactgtg aggccatgga gacccgaagc cactgggccc agcaactggt
     1501 gacagagttt cagagtagga tggagaagtg gtgtgaggag agcagtgtga agccaccttg
     1561 gcatctgggg gtagaccctc cctttcggaa gaaagcagat tctttctcta gtcctggaaa
     1621 gagccctctc gacaaaagcc ctactcaggg ccggcaagct gcctttgggt ctccagcatg
     1681 gagtcgctta cgctctagct gcctggttgt acgagtagat gacctggata tccaccaggt
     1741 ttccacagcc ggacagccaa gtaagaagcc gtccaccctg ctctcctgca gtcgcaaacg
     1801 ccaccgcctc ccgagccagg tggctgccat ccatgtacag ttcacagagt attacttccc
     1861 ggataatcag gagcttccag ttccgtgccc caatctctac atccagttaa acgggctgac
     1921 gcttaccgtg gatcccgtca gcttgctctg gggaaacctc ttctgcctgg acttgtaccg
     1981 aagcttggag cagttcaagg ccatctacaa gctggaagac cccaggggca aggatgagca
     2041 cttggacatc cgactggatg cgttctggtt gaaggtgagc ttcccactgg agactaggga
     2101 cctggcgaag ctgcaccgtc cccaggcgct tgtcctctcc acgtcgggcg tgattgccac
     2161 caacacccgg cacgccccac actgcagttg tccagacctc cagggcctct tccggggctt
     2221 tgctgccacc gagttcttcc gctccagcta cggtcacttt cccaaggttc cagggggctt
     2281 cagcctcctg cacatggtct tcctgcacca cgccttccag acggactcgc ttcccgccca
     2341 gcctagttcc ctgcctcctc agaggccagc ggcggcccag gacctttggt ccctgcattt
     2401 cacccagatt tccttggact tcgaaggcac agagaatgtc aaaggccatg ccttgaattt
     2461 tgtggctccc ttccccctgt ccatctgggc ctgccttcct ctccgctggc agcaagccca
     2521 ggctcggcgg ctccttttgg cctccgaggg gaggctgaaa ccgtcagcta gcttcggcag
     2581 ccctgtgcac tctgaggctc ttgcccccga gtccgtgtcc catcagaggt caaagactga
     2641 acgagatttg aaaagcctct ccggctcggg ggaagtcctg ggggctgtga gagaaggtga
     2701 tgctggtgtg gaccacagag ggcaggtggc tgagctggag gatgtggcag acattcacat
     2761 gcttgtacac tccactgccc atgtcagagt gaggctggac cactaccagt acttggccct
     2821 gctgcgcctc atggaggtgc ttcagggcct tcaggagcag ctgaccaagg acacagaggc
     2881 catgactggg tctcccctgc aggaccagac agtgtgtgtt ggagttctct tccccagtgc
     2941 tgaggtggct cttctcatgc ccccggaccc cggggccgct cacgcagact ctgcgggctc
     3001 agacaccacc agcctcatag actcagagct gtcgccatca gaggaccgag agccaaagtc
     3061 ggatgcctcc tcagaccagg gcccagtgag ccctgagaag gtcctgaggg acagcagcgc
     3121 tgaaaatctg gatgcgtccc aggagaggct acatggtgat ggggagctac aggacgtcgg
     3181 tccactcgca cagcagccag cagggaagag ccatgaggcg gtcgagtctt tacaggccaa
     3241 gaagttgagc agagctcaaa ccgccaccag cccaccgact gcggacaggg atgctgctct
     3301 gaatggacaa ggcgagccca ttcccttgag gagcattgag ggggaattgt ccagtgccat
     3361 tcacatgacc aaggatgcca ccaaagaggc tctccacgct accgtggacc ttaccaagga
     3421 ggctgtgtcc ctgactaggg atgccttcag tttgggtaga gatcgaatga cttccaccat
     3481 gcacaagatg ttgtccttgc ctcctgccaa ggaggccatg gccaagtcag acgagggagt
     3541 ggcggcccca gcgagtggag gtcctgcccg gctccggttt ttctccatga agaggacagt
     3601 ctctcagcag tcattcgatg gtgtctcgtt ggacagcggg ggccccgaag accggatttc
     3661 ggtggacagc gatggcagtg acagctttgt gatgctcttg gagtctgagt ctggtccaga
     3721 gtctgttcca ccaggatctg tgacaagcgt cttggatgat agtggcattc aagggagccc
     3781 tgtcatggat agcagtggcc aggggttgcc cgagaccaac agctcagcgt cagccagtgg
     3841 agacctcgcc ctgcactcgg tgtcagttct ggtcctaaag gtgagcgaag tgtcacttgg
     3901 gcttgaggtt cgcggtgagg acctggccgt agccttgcaa gcacagcagc tggccctgca
     3961 gcagctcggc accgtgggac tctggcagtt tctacatgga cagtgcccag gcccaagctt
     4021 tgagggaccc tcggacctga agactgactc caccaggcct gctgtgggtc tgcgttttga
     4081 ggtggggcct ggtgcagctg ttcattcccc gctggccgcg cagaatggct tcctgcggtt
     4141 ctcacttcgg ggctgtgacc tggagctgtt cacctcagtg ctcaacggtc tggggccttt
     4201 cttggaggat gagtgcgtcc cggtggtagt ccccatgcag atggagctcc tggactgcag
     4261 tgttactctc aaggatgata tccctccaat ctatccaaca tcccctggcc ctgtgcccat
     4321 cactttgaca atggagcgtc tcatgctgaa gcggggtgac gatggtgtgt ttcaccttgg
     4381 tgctcctgct caggacaggc cgttggctga aggacctgag aagcagcagc tcccgaaaga
     4441 gcaggtgccc ctggtgccca caggacaggg cttgggacac caggctcaag gagatgctac
     4501 tgtgttctct agtggtgaac tgtttctcct tcaggagaaa ggctcgccta ctctgcagca
     4561 agaacttgca gacaccaaac aagcactggc cattgccaac caggacagag aaaagctgct
     4621 ccaggagatt aggaaataca acccactctt tgagctttga cagcggctca gccgtccagg
     4681 ctccacagag aagctatcac cagcaacagt gccgcctggg acaggcgctg gcccgggagc
     4741 cagcagggcc aggagcacac gttcattcct tgtgtgcttc ctgctggctg ccagcctggg
     4801 cggaggagga gccggcagag catggccgca cccaggaatg gggtggctct gtccctggcc
     4861 ctgcactgcg tcttgccatt aatgtagcct tgtagtcctc tgcacactag aggagtcttc
     4921 tctacatcgt agagcgtttc acctcctggt gtcacggcag tgtctgcttc cttcatggcc
     4981 tatgtgaaca ggtgtccacc gagtcatgca cacagccacc aaagatcccg tgtcctggag
     5041 cttcctgtgg cgtacctgag aggtccttgg cctgagtctt gaagtagatc gatcaatagc
     5101 cgatcctcag gggttgaggc agaggaggtc tgcgatcagg gcaacatgga ctcgcctcag
     5161 tggaacggga gctaggctcg tgtcatcttg gctgatgttc tgggtcaagc tttcatgtag
     5221 gatttcttcg ttgtgatgct ttgactctga agtggctaga tcctctttcc ctgcataaga
     5281 attggtttga ggtttaagtc aggacagggc tcacctgctc ccgagtgctc agctgagagc
     5341 atgacagggt ggggatacag ttgctgtttt cacagctgtc catgacaggt cccttccttt
     5401 ctgttcctgg agtcacctgc tttcccagga ctgcctcatc tttctgcctg tgcttctggt
     5461 aggcttccga ctgagctaaa cttagttcta cccacctcgg tatgctgcct cactcccctc
     5521 tatttggttt tttaaaatca tgtttcccag gtttccttct ggtcctatca aagtttcccc
     5581 tttccttccg attgtcagag cttggctctg tggtgtgctg tctgggtaga agcacagcct
     5641 ggctgactcg cttacttggc agatggtctg tccgtctgtc gtgagctggt gatgctctgg
     5701 agtcctgact gtggctgagg gagggaagga ggagaaccat tccacgtaaa aaggagcaca
     5761 gctatggaag gataaggtca cactgttcag acttgcaggg ccagacatgt tcttcaccaa
     5821 ggcaaatttc agaacaccac gtcttacaga actggtttgt taaactgagg agacacagat
     5881 ttggggacaa catcttctgg agacagtgtt aacaggtgaa gttccctcat ttcaaatttt
     5941 ttataaatga cctagaactt taaatggtga actgtttatc cttcagaatg ccattctgtt
     6001 tacattcgat gtcacacaac ttgtagacag tgaaaagcag accagaagac agaaataacc
     6061 ataaagccac aggggagtga gcaaggctgt gaacaggcag cctgacagga gaggttcagc
     6121 acagtggagg gctggagtgg agcccagtag tagagtatgt gagcggcacg tgagggcctg
     6181 ggctcagccc acgatcacaa actctgtcac agaaataaag actgtatgtc taaacaaccg
     6241 ccactactac tagaaccaaa tactcaggaa agaagccaga gccttgctga gggagcaggg
     6301 atcagtgaga tgctgtggtc taaagcccgg cggtgcccca gcacagggga gtgccctcat
     6361 ccccctactg ggcacttcga ttgtacttgt ttatctggga gttggagagt gatcaaggtg
     6421 aagacattgt cctgaggggg gcaagggacc acacacagga tcggggaccc aatcttgaaa
     6481 ctttagttct ggggccctgt cactgcctca gggaaaaaga aagcactttt agcaaagtca
     6541 ggaacttgaa gggcttgttg gagaagcggc ccctgtgttt ctgacattct tggagggaag
     6601 ggagagcagt aactaggaaa caggatcttc agggtcactt gacctggctt acatcaaatc
     6661 ccttcctctt ccgctcactg catcccctcc ctcaggaaaa gatttctgac aaatacttgg
     6721 tgcactttac ccttgagctt gcagtagaga cctattttgt gtcaaggaca atgccttaat
     6781 ggccagaacg tcaggttttt gagctaaggg agtctgggct tcttgtccat gtgcaaacag
     6841 agatgtagag ttctggcccc ctttatgctt tggcctttgt gtcttgaaat cagccctcgg
     6901 gaaggaagcg tgggaagatt acatcccatg gcatttcaat agtgtcttgc gattccattg
     6961 ccctgttcac tgggggatga gcaggagaga cttggccata atgcacctgg ctgtgtggat
     7021 ctccagggta agggtacggg aaaccgtcag gcagtgcttt tgaagttcag ctgtgaagtt
     7081 gcagtttgca atacgaaata cctcgagact tctgcaggga ccgcaacact gtccctcaga
     7141 gtgttcagtc actgcacatg gccctcagct gtaaaactct ttatagctgc atcatctgtg
     7201 attgtcgaac tttcctgttt acatgcctgt gccggcagtg ttccctggtg tgtgtagact
     7261 tagagttgag cccgctaact gggctgcaga gatgtggctc aaactcattt tcagtttact
     7321 ggaatgatga acggagtctc tgatggtgcc aacatggctt ctctctctcc ccatgagctg
     7381 ttttcagttt cactctctga ccttaccgag ctatgggctg cactctttgt gctctgtgct
     7441 gagagaaacg ggacatgtga agtagaaagt gtcgctacca caactcagca aagcccggaa
     7501 ccaagtatct gctgtcttta tgttgtgttg ggttttcctt aggggctcca gaggttgagc
     7561 cctgcagagg tggtgtgagg tttcctgggt gggagctttg tattcctgac ccctttcttt
     7621 catcttgatg cataaactac ccaagctagc agattaacat ctgcttaaga ccacaacagc
     7681 caggactcgt agttatgaac tcttggagat gggcaatgca cgtttgtctg ggtgatcaga
     7741 gccttgcagg tgccaccact ctctccagtc cagttctcca gggtaggtat ggagagtggc
     7801 tgttagtgaa gaaagaggcc ttctgccccc aaggcacagg gaaaaacttg gtaactttta
     7861 acagttaagc cttgctaaag tggccaggcc tgagatctga gcttcctgtt ctgctgctgt
     7921 gtttcttatc ctgtatcctt tatcaaagtg gacatactcc tgtgtgttaa gaatttccta
     7981 ttggagttgt gagggaaatt ttttgtcagt ttactacttt ctggtgaaga gttagcttga
     8041 gtcttacatg ctttctgtgg agtgccccca cggaagtgtc ctctgcactg gctgagccag
     8101 tgagtttcaa tgtaagttcc taagttagat cagtccaatt acgtgagtct gaactgtttc
     8161 cctaactcag ggtgctaaaa taagacttgc tcaggaaagc ttcagaagaa aacagcttcc
     8221 aagcctgctt cccgtgacac tcagcagcac atggggagcg ggccagcaga ttgccaacta
     8281 catcaggtag ccttactact gctaatcact gtcaatgccc ttcattctcc gaggagagca
     8341 gtgagaatgg atacagtgaa ctgaaccttg gtcagtattg ggaaatttac tgttgaaata
     8401 gctaatcgag tcccaagtgt actggttctg tgaaccacct gaaaagcaaa ataaatgata
     8461 ccattgaatg gca
//
