LOCUS       NM_001024233            1608 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus basophilic leukemia expressed protein BLES03
            (Bles03), transcript variant 1, mRNA.
ACCESSION   NM_001024233 XM_341992
VERSION     NM_001024233.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 1608)
  AUTHORS   Bitto,E., Bingman,C.A., Robinson,H., Allard,S.T., Wesenberg,G.E.
            and Phillips,G.N. Jr.
  TITLE     The structure at 2.5 A resolution of human basophilic
            leukemia-expressed protein BLES03
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 61 (Pt 9), 812-817
            (2005)
   PUBMED   16511166
  REMARK    GeneRIF: Structural characterization of the human ortholog.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK596744.1, BC093387.1 and AF502571.2.
            
            On Oct 3, 2008 this sequence version replaced NM_001024233.1.
            
            Transcript Variant: This variant (1) represents the shorter
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ233132.1, EV767184.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-707               CK596744.1         1-707
            708-1579            BC093387.1         567-1438
            1580-1608           AF502571.2         787-815
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1608
                     /gene="Bles03"
                     /note="basophilic leukemia expressed protein BLES03"
                     /db_xref="GeneID:266609"
                     /db_xref="RGD:628612"
     exon            1..231
                     /gene="Bles03"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..988
                     /gene="Bles03"
                     /note="isoform 1 is encoded by transcript variant 1;
                     basophilic leukemia-expressed protein Bles03; UPF0696
                     protein C11orf68 homolog"
                     /codon_start=1
                     /product="UPF0696 protein C11orf68 homolog isoform 1"
                     /protein_id="NP_001019404.2"
                     /db_xref="GeneID:266609"
                     /db_xref="RGD:628612"
                     /translation="MAAAAAAVAGAGRGGGGGADPGQERSRARSWVGAERSEGRRMEP
                     NEELEEEDSPGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQ
                     VTRYGDPGSPNSEPVGWIAAYGQGYTPNSGDVQGLQAAWEALQTSGRPITPGTLRQLA
                     ITHHVLSGKWLIHLAPGFKLDHAWAGIARAVVEGRLQVAKVSPRAKEGGRQVICVYTD
                     DFTDRLGVLEADSAIRAAGIKCLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGN
                     ARGSRVLDRANNVELT"
     exon            232..1599
                     /gene="Bles03"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgccccttc ccctggagcc cccgccccta gccttctggt tccgcctctg gccccgcccc
       61 gtgactgtgt ttgtctataa agttgttgtt gaggtggcgg gaccctaaga tggcggcggc
      121 ggcggcggcc gtggcagggg cggggcgcgg cgggggtggc ggcgcagacc ccgggcagga
      181 acggagccgg gcccgaagtt gggttggcgc ggagcggagt gaaggccgga ggatggaacc
      241 aaatgaagag ctggaagagg aggactctcc aggtggtcgt gaggatggct tcactgctga
      301 gcacctggct gcagaggcca tggcagctga catggacccc tggctggtat ttgatgcccg
      361 tactacacct gccacagagc tggatgcctg gttggccaag tacccaccat ctcaagttac
      421 tcgctatggg gacccaggtt cacccaactc tgaacctgtg ggctggattg cagcctatgg
      481 gcagggttac acccccaatt caggggatgt acaagggctg caggcagcct gggaggctct
      541 gcagaccagt gggcgaccca tcacaccagg taccctgcgc cagctggcca tcacccacca
      601 tgtgctctcc ggcaagtggc tgattcacct ggcacctggc ttcaagctgg accatgcctg
      661 ggctggcatt gcccgggctg tagttgaggg ccgtcttcag gtggccaagg tgagcccacg
      721 ggccaaggag ggtgggcgcc aggtcatctg tgtttacacg gatgacttca cggaccgctt
      781 gggagtactg gaggcagatt ctgccatccg tgctgcaggc attaagtgct tgctcactta
      841 caaacctgat gtctacacct acctgggcat ctaccgagcc aatcgctggc acctttgtcc
      901 cactctctat gagagccgtt tccagcttgg aggcaatgcc cgtggctctc gagtgctgga
      961 tcgtgccaac aatgtagaac tgacctaatg gggccaagta ggagagacca ccttttgctt
     1021 cccagctggg gatggatcct tctttcttct cttccttgtc ccaagaaggc tgagctccct
     1081 agctctgagg actcattgac ttgggaactg cctgcactca gtccctttga acctctgtgc
     1141 agggccaact ccaacctcca caggtttggg gctctggctc tctgagggcc aggcccttgg
     1201 ctgcctcttt gatgctgctc cccaccactg cccaggacca cagcttgggt gcagatactc
     1261 aagaaagtct gccctggcca cctctgtccc tactatactt agcctgcatt cttccttttc
     1321 tttcctccct cagaagggag aaaacttagt gcttccagtc cctgcccttg gagccatcat
     1381 ggcccaggtg gcaggaccct tacaggactc agcatgctat tgggacccta acgtgttctg
     1441 gccaagagga gatgcagggt cggacatgag gtctgctcct ccctgcacac tcatagcctg
     1501 catcaccaat attccttccc tggctccctt gacatgtgcc tgctcctggc atttcaataa
     1561 aacccagctt gggtctgtgt cttgagtgtt ttttaaaaaa aaaaaaaa
//
