LOCUS       NM_001009524            2605 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus beta-galactosidase-like protein (Bin2a), mRNA.
ACCESSION   NM_001009524 XM_579305
VERSION     NM_001009524.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Zhen,W., Li,P., He,B., Guo,J. and Zhang,Y.L.
  TITLE     The novel epididymis-specific beta-galactosidase-like gene Glb1l4
            is essential in epididymal development and sperm maturation in rats
  JOURNAL   Biol Reprod 80 (4), 696-706 (2009)
   PUBMED   19092116
  REMARK    GeneRIF: GLB1L4 may play various roles in principal cell
            differentiation and sperm maturation.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001009524.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY040870.1, AF299297.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-257               JAXUCZ010000008.1  33562648-33562904   c
            258-350             JAXUCZ010000008.1  33561164-33561256   c
            351-548             JAXUCZ010000008.1  33560436-33560633   c
            549-617             JAXUCZ010000008.1  33555901-33555969   c
            618-713             JAXUCZ010000008.1  33554911-33555006   c
            714-822             JAXUCZ010000008.1  33553989-33554097   c
            823-915             JAXUCZ010000008.1  33551123-33551215   c
            916-997             JAXUCZ010000008.1  33548034-33548115   c
            998-1062            JAXUCZ010000008.1  33546987-33547051   c
            1063-1147           JAXUCZ010000008.1  33546199-33546283   c
            1148-1285           JAXUCZ010000008.1  33545271-33545408   c
            1286-1366           JAXUCZ010000008.1  33542475-33542555   c
            1367-1473           JAXUCZ010000008.1  33541770-33541876   c
            1474-1620           JAXUCZ010000008.1  33530762-33530908   c
            1621-1689           JAXUCZ010000008.1  33528436-33528504   c
            1690-1777           JAXUCZ010000008.1  33527892-33527979   c
            1778-1865           JAXUCZ010000008.1  33527038-33527125   c
            1866-1977           JAXUCZ010000008.1  33526430-33526541   c
            1978-2094           JAXUCZ010000008.1  33525637-33525753   c
            2095-2158           JAXUCZ010000008.1  33525462-33525525   c
            2159-2605           JAXUCZ010000008.1  33524302-33524748   c
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..2605
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /note="beta-galactosidase-like protein"
                     /db_xref="GeneID:494244"
                     /db_xref="RGD:1359233"
     exon            1..257
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     CDS             253..2166
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /codon_start=1
                     /product="beta-galactosidase-like protein"
                     /protein_id="NP_001009524.2"
                     /db_xref="GeneID:494244"
                     /db_xref="RGD:1359233"
                     /translation="MSMWTFLGRPECILCLSSTLGVMAFLSNNQLPRLNQSHLTPLWL
                     LTRRVGLKVKDSQFTLEGFPFRIISGAIDYFRVPRQNWRQSLRKMQACGFNTLTTHIP
                     WNLHEPTMGRFQFIENMDLVAFITMASETGLWVILCPGPYIGGDIDLGGLPSWLLKDP
                     KMKLRTTYKGFTKAMNRYFNNLIPRIAQLQYNKGGPIIAVQVENEYGSYYMDKKYMEY
                     VKTALVSRGIDELLMTADDGVSLRKGHLQNVLATVRMKNINKETYEDFKFIQGRSPIL
                     MTVYTTNSFDTWGALRQLGDPQMLMKDVREIFNLGFSLNFYMFQGGTNFGLIGGAQSA
                     EGYTPVVTSYDYCALITENGDYTPEYQEFQRFFHSVTDFSPLTRPKATLTFAYQPLTL
                     LYYMTLWEVLPYLVKTTKSSRPLSMEQLTVNGRSGQSFGYILYETTIFNGGLLTSRGH
                     IQDRAQVFLDKDYVGLLDRSNKELLLYKDLTKKTQTLRILVENQGRLTSGQDMNKERK
                     GLTGDIYLDKSPLRPFKIYSLEMGNVFIQREFPKYWKTATSPVMGPAFFLSHLKAGDP
                     PQDTFIQVKDWGKGVIAINGRSLGRYWNIGPQETIFVPGSWLHPGVNTIIMFEELKGG
                     VKIHFTSRAHLGH"
     exon            258..350
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            351..548
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            549..617
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            618..713
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            714..822
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            823..915
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            916..997
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1062
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1063..1147
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1285
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1286..1366
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1367..1473
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1474..1620
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1621..1689
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1690..1777
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1778..1865
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1866..1977
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            1978..2094
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            2095..2158
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
     exon            2159..2605
                     /gene="Bin2a"
                     /gene_synonym="Glb1l4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgccccggt ggggacacta ggcggctgca gactgcagcg gtcgggaaaa gtccgcagtg
       61 ctgtggctgc tgctggctga cagtgactag cttcgagaag agatcagccc agtaagacat
      121 cagcatctcc tccttgaggt ctttggaggg cctgtgtgcc aagcacatct tgtgtgaagg
      181 acaggaggct gggtgctggc ttgtgatttc tcccaccggc agagccaccg tggcagtgca
      241 tgctggacca ggatgagcat gtggaccttc ctggggagac ctgaatgcat cctgtgtctg
      301 tcttcaacct taggcgtgat ggcttttctc agcaataacc agttacccag gcttaatcaa
      361 tctcacttga cccctttgtg gctgctgacc cgaagggtag gtctgaaagt caaggactca
      421 caattcacac tggaaggttt tccattccgg atcatatctg gcgctataga ctacttccgg
      481 gtacctagac agaactggag acaaagtttg aggaagatgc aggcctgtgg cttcaacact
      541 cttaccacgc atattccttg gaacctccat gagccaacta tgggccggtt tcaattcatt
      601 gaaaacatgg acctcgtagc ttttatcact atggcttcag agacaggact ctgggtcatt
      661 ctgtgtccag gcccctacat tggtggtgac atagaccttg gaggtttgcc cagctggttg
      721 ctcaaggatc caaaaatgaa gctgcggaca acttacaagg gatttactaa agcaatgaat
      781 cggtatttca acaatctgat tcccaggata gcacaactcc agtataacaa aggaggcccc
      841 atcattgctg tgcaggttga gaatgaatat ggctcctact atatggataa gaaatacatg
      901 gagtatgtga aaacggcttt agtgtcaaga gggatcgatg agctgctcat gacggcagat
      961 gatggtgtga gtctcagaaa gggccacttg caaaacgtac tggccactgt tcgcatgaag
     1021 aatataaata aagaaacata tgaagatttc aaattcattc agggtagaag ccctattctg
     1081 atgacggtat atacaaccaa ctcttttgac acatggggag ctctccgcca gcttggggat
     1141 ccacagatgt tgatgaagga tgtgcgtgag atcttcaacc ttgggttctc cctcaacttc
     1201 tacatgttcc aaggtggcac caactttggc ttaatcggtg gtgctcagtc tgcagagggt
     1261 tacacacctg tggtaaccag ctatgactac tgtgcactga taacagaaaa tggagactac
     1321 acacccgagt accaggaatt tcaacgtttt ttccattctg ttacagattt tagcccgctc
     1381 actcgaccaa aagctacact gacgtttgcc tatcaaccac taacattatt atattacatg
     1441 accctgtggg aagtcctgcc ctatctggtc aagacaacca agtcttccag gccactatcc
     1501 atggagcagc tgacagtgaa tggaaggagt ggtcagtcct ttgggtacat actttatgag
     1561 accaccatct tcaatggagg cctcctcaca tcacggggtc atattcaaga ccgggcccag
     1621 gtgtttttgg ataaggacta tgtaggactt ttggaccgct ccaataaaga gctgctgctt
     1681 tacaaagatc tcaccaagaa aacccagact ctgaggatcc tggtggagaa ccaaggccga
     1741 ctcacttctg ggcaggatat gaacaaggag agaaaaggtt taactggaga catctatctt
     1801 gacaagtctc cactaagacc atttaaaatc tacagcctgg aaatgggaaa cgtattcata
     1861 caaagggaat ttcccaagta ctggaaaaca gcgacaagcc ctgttatggg ccctgccttt
     1921 ttcctcagtc acttgaaagc tggagatcct ccccaggaca ccttcataca agtaaaggac
     1981 tggggaaaag gtgtcatagc catcaatgga aggagcctag gacgatattg gaatattggc
     2041 ccccaggaaa ccatctttgt ccctggctcc tggcttcacc ctggagttaa tacgatcata
     2101 atgtttgagg agttgaaagg tggcgtaaag atccacttca caagcagggc tcatctagga
     2161 cattgaatct caagagatgt gatgtaagct agaagacagc cagctgaacc acatctgcag
     2221 tggtcctggg agcaatccgt cagtcctgac ctataggtcc atctacactg gcttcattct
     2281 ctaccccatg ccaggcgtgg gttccaccat ccaccttctc acttgacagc aaacccagct
     2341 tttgactcat tagcttacct gtttctgatg ctcacaacga aataggcttt acccactcac
     2401 tttctttgtc acatttcttc tgttcaaagc tctttgacga gcaaataaaa ttttgggaaa
     2461 aatgctcaga ataactggca ttgcaagtgc aaatccgaag tgaaaacaaa tgttttctaa
     2521 gaagtcaaat aaaatagaaa ctgcaggcaa tggcgggggt tatcatatat gttttcttga
     2581 tttagagtaa aaaacatcaa tggtg
//
