LOCUS       NM_001191667            3006 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus BICD family like cargo adaptor 1 (Bicdl1), mRNA.
ACCESSION   NM_001191667 XM_222240
VERSION     NM_001191667.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   Schlager,M.A., Kapitein,L.C., Grigoriev,I., Burzynski,G.M.,
            Wulf,P.S., Keijzer,N., de Graaff,E., Fukuda,M., Shepherd,I.T.,
            Akhmanova,A. and Hoogenraad,C.C.
  TITLE     Pericentrosomal targeting of Rab6 secretory vesicles by
            Bicaudal-D-related protein 1 (BICDR-1) regulates neuritogenesis
  JOURNAL   EMBO J 29 (10), 1637-1651 (2010)
   PUBMED   20360680
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Jun 30, 2017 this sequence version replaced NM_001191667.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.551204.1,
                                           SRR22582424.85624.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-431               JAXUCZ010000012.1  46539070-46539500
            432-647             JAXUCZ010000012.1  46545477-46545692
            648-764             JAXUCZ010000012.1  46601587-46601703
            765-911             JAXUCZ010000012.1  46604517-46604663
            912-1091            JAXUCZ010000012.1  46611113-46611292
            1092-1310           JAXUCZ010000012.1  46612023-46612241
            1311-1441           JAXUCZ010000012.1  46618795-46618925
            1442-1562           JAXUCZ010000012.1  46622903-46623023
            1563-3005           JAXUCZ010000012.1  46625434-46626876
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..3006
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /note="BICD family like cargo adaptor 1"
                     /db_xref="GeneID:304537"
                     /db_xref="RGD:1310292"
     CDS             1..1722
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /note="bicaudal D-related protein 1; coiled-coil domain
                     containing 64"
                     /codon_start=1
                     /product="BICD family-like cargo adapter 1"
                     /protein_id="NP_001178596.1"
                     /db_xref="GeneID:304537"
                     /db_xref="RGD:1310292"
                     /translation="MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPAAAAALV
                     SFPGGPGELELALEEELALLAAGERPSDLGEHPQAEPGSPAEGHGPPPPPTQDPELLS
                     VIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENR
                     EGEWEGRVSELETDVKQLQDELERQQVHLREADREKTRAVQELSEQNQRLLDQLSRAS
                     EVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEE
                     NDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQVKVEELTEERS
                     LQSSAATSTSLLSEIEQSMEAEELEQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSA
                     VSTDSSMDESSETSSAKDVPAGSLRTALNDLKRLIQSIVDGVEPTVTLLSVEMTALKE
                     ERDRLRVTSEDKEPKEQLQKAIRDRDEAIAKKKAVELELAKCKMDMMSLNSQLLDAIQ
                     QKLNLSQQLEAWQDDMHRVIDRQLMDTHLKEQSRPAAAFPRGHGVGRGQEPSTDGKRL
                     FSFFRKI"
     exon            1..432
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            433..648
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            649..765
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            766..912
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            913..1092
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..1311
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            1312..1442
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            1443..1563
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
     exon            1564..3006
                     /gene="Bicdl1"
                     /gene_synonym="Ccdc64; RGD1310292"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtccgcct tctgcctggg cttggccggc cgagcttcag cacccgccga gccggacagc
       61 gcctgctgca tggagctgcc cgctggggcc ggggacgcag tccggagtcc cgccgccgcc
      121 gccgcccttg tctctttccc cgggggtccc ggggaactgg aactggcctt agaggaggag
      181 ctggcgttgc tggcggccgg ggagcggccg tccgacctcg gggagcatcc tcaggcggag
      241 ccggggtctc cggctgaggg gcacggaccg ccgccgccgc ctacccagga tcccgagctg
      301 ctgtcggtga tcaggcagaa ggagaaggat ctggtgttgg cggcccggct aggcaaggcg
      361 ctgctcgaga ggaaccagga catgagccgg cagtacgagc agatgcacaa ggagctgacg
      421 gacaagctgg agcacttaga gcaagagaag catgagctga gaaggcggtt tgagaaccga
      481 gaaggggagt gggaaggacg agtgtccgag ctggagacgg acgtgaagca gctacaggac
      541 gagctggaga ggcagcaggt ccatcttcgg gaagcggatc gagaaaaaac tcgcgctgtc
      601 caggaactgt cagaacagaa ccaaaggcta ctggatcaac tgagcagggc atctgaagtt
      661 gagagacagc tatccatgca ggtccatgct ctcaaagaag actttcggga gaaaaattca
      721 tccaccaacc agcatatcat ccggctagag agccttcagg ccgagatcaa gatgctgtcg
      781 gaccgaaaac gggagctgga gcatcggctc agtgccaccc tagaggagaa tgacctgctt
      841 caagggactg tggaggagct acaggaccgg gtgctgatcc tagaaaggca gggccatgac
      901 aaagacctgc agctgcacca gagccagctg gagctccagg aggtccgtct gtcctaccgg
      961 cagctgcagg tcaaagtgga ggagctgacg gaggagagga gcctgcagag ctcggcggcc
     1021 accagcacgt ccctgctgtc agagatcgag cagagcatgg aggctgagga gctggagcag
     1081 gagagagagc agctgaggct gcagctctgg gaagcctact gccaggttcg ctatctgtgc
     1141 tcacaccttc gagggaatga cagcgccgat tcagccgtgt ccacagactc ctccatggat
     1201 gagtcctcag agacctcatc cgccaaggac gtgcctgccg gcagcctgcg caccgccctc
     1261 aacgatctca agaggctgat ccagagcatc gtggacggcg tggagcccac ggtcacgctg
     1321 ctgagtgtgg agatgaccgc cctgaaggaa gaaagggaca gactcagagt gacatctgag
     1381 gacaaggagc ccaaggagca gcttcagaag gccatcaggg accgggacga ggccattgca
     1441 aagaagaagg ctgtggagct ggaactcgcc aagtgcaaga tggacatgat gtctctcaac
     1501 agccagctac tggacgccat tcagcagaaa ctgaacctct cccagcagct tgaggcctgg
     1561 caggatgaca tgcacagggt cattgacagg cagctgatgg acacgcacct gaaggaacag
     1621 agccggcctg ctgctgcctt ccctaggggc cacggcgtag ggcgggggca ggaacccagc
     1681 acagacggca aacggctctt ctccttcttc aggaaaattt aagtggggag gagtctggcc
     1741 attgagatgg ggggactagc agcacctgaa aagggtcccc tttagctgga gctgggcagc
     1801 tacactgccc gcccacctgc cctggggccc agttagctcc agagagctca ctccctatgt
     1861 cagcgtaatg gaggctgaga ggtagggcct gctctgtcct ctgaaggctg cccacccccc
     1921 acacacacaa gggacaggaa tgtatcttgt ccccactgcc caagccaagc ctcagcctgg
     1981 gcttgcccag gatcctgtta gtgagcaggg ctcagccact tcccatgcag cccactgctg
     2041 ggctctgcca cccaggccca gctgagcaca gcccacccta taaaggctct gctgcctcct
     2101 tggttttgaa catggggaac agattggggc ctcctgtgca tgcctcagga ggcctaagcc
     2161 tccgctcctg ctccagccac tggcctggag tgtggggaga cacagccctc acccaagtgc
     2221 atgcacctct gctggagccc ctgtacggca ggcggctcag cctacggctg tgaggcctaa
     2281 gaactgggtg tacccaagcc ctgttgaggc cgtcctgcac cccagggaag gtcctgtctt
     2341 ctggctgcca ccactcctca gcttcctcca gtgcagtcct tagccctagg gaggcctggg
     2401 ccaggctgtg tcccattggc cctgtaggct ttagccttcc agacttttcc cccatcacgg
     2461 gataggacta ggagggcact tgtcttccac agctccctcc cacctcaaat gcaacttctt
     2521 ggccaagcca agcaagttca ggccacaaga gtggccttgg aggggcctgg ttttaccacc
     2581 ctcacactga aggcagcgtg ggtgccacag ggtagatggg gcaaggctgc tgggagcctc
     2641 cagatactgc ccaccaggtc tctaagggac aaaggccttc agcctgctgc ttctgctcct
     2701 tccgcagcag ccaccccatc tcagccgagg ccccagctca aggctctgtg gggccggcct
     2761 gcactgctct ccactcactg agcctcctcc ctcgacaggg acaagcacag cagggctgag
     2821 cgacagaatg tacttacaga catgtacata ccacagtgct gtaattttgt atgtagcaat
     2881 tgtgtaaata cacgtatgga ttttataata cacacataaa tctataaagg catattttta
     2941 gaaaaacagc gcaccactgc ttcttttgga aatagtctga ataagaataa aatgagtttc
     3001 tacaga
//
